ggKbase home page

13_1_20cm_full_scaffold_226_17

Organism: 13_1_20cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 11950..13752

Top 3 Functional Annotations

Value Algorithm Source
msbA; lipid A export ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 599.0
  • Bit_score: 645
  • Evalue 8.30e-182
Lipid A export ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A621_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 595.0
  • Bit_score: 482
  • Evalue 6.50e-133
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 598.0
  • Bit_score: 540
  • Evalue 7.60e-151

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1803
ATGGGCCGTAGCGGCCGGCTCTTGCTGCTGCTCCGCCCCTACACACTCCTCTTCGTCGGCAATCTCGTGGCGACGTTCGTGGCATCCGTCATGGATGGGGCCACGTTCGTGCTCCTGATCCCGTTCTTGCGCGCGCTGTTCGGCCAGCAGGCGCTGCCCGCGGTTGGCGGCTCGACCATCGAGACGCTGGTGGCCAAGCTCGCCGGGCCGTTGCTCGCGACGGGGGCGCCGCAGACGGCGCTCCGCAGGGTGGTGCTGGTGCTCCTCGGGGCGCTGGTGGTGAAGAACGCCGCAGGGTACGCGGCTGCGATGAGCAGCGTGGCGATCGAGGAGGGGGTGGTACGCGACCTGCGCGTCCGCCTGTTCCGCCACCTTCAGAGCCTGCCGCTCGGCTTCTTCCAGCGCACGCGCGGCGGCCAGTTGCTCGCCCGCATCATCTCCGATACCGACCAGGTGAAGACCGCGGTCACGGCCGCCCTCGCGTCGTTGGTGCGCAACGCGAACCTGATCGTGGTGTACGTCGCCATTCTGTTCGGCCTCTCCTGGCGGCTCACGCTGATCGCGCTGGTGCTCGCGCCGCTGCTGGTGCTCATCATCCGCCCGATAGTGGCGCGCGTGCGGCGCCGCTCGCGCGAGCAAGCGGAGGACCGCGGCGAGCTCACCAGCCTCGTGAGCGAGATGGTCGCGTCGGTGAAGCTGGTGCGGGCCTACGTGGCGGAGGCGTTCGAGGTCGAGCGCTTCCAGACGCTGGCGAACCGCTACCGTCAGCGCGTGCTGCGCGCGCAGGGCGCCTCGACTCTCACGAGCCCCATCAGCGAGATCTTCGCCGGCATGGTGGTCGTGCTGATTTTCTCCGTCGGCACGACCCTCGCGCTCGGCACATCGGCCTCGCTCCGGCCCGAGGTGTTCATCGCCTTCGTGGCGGTGGCGCTGCGACTCATGTCGCCGGTCAAGGCCGTGGCGCAGTATCCCACCATCATGGCGGGCGCCGCCGCTGCCGCGGATCGCGTGTTCGAGGTGCTCGACCTGCCGGCCGGCGAGGGCGATCGGCCGGGCGCGGCGCCGGCGCGCTTCCACGACCGCATCGAGTATCGGGGCGTGTCGTTCTCGTACGACGGTGAGGCACCCGTGTTGCAGGACGTGGAGCTCGAGGTGCGGCGCGGCCAGGTGGTCGCGATCGTCGGGCCGTCCGGTGCGGGCAAGACCACGCTCGTGGACCTGCTGCCGCGGTTCTATGAGCCGACGCGCGGTGACATCTTGATCGACGGCGTTCCCATCGCTGGGTTCACTCGCATCAGCCTGCGCGGGCTCATGGGCATCGTGTCGCAGGAGACCATTCTGTTGAACGACACGGTGCTCGCGAACATCTCCTACGGGCGAAGCGACTTCACGCTGGAGCAGGTGCACGCCGCCGCGCGGGCCGCCAACGCCCACGACTTCGTCTCGCAGCTCCCTGACGGCTATCGCACGCTCCTGGGCGAGCGCGGCACGCGGCTCAGCGGGGGCGAGCGGCAGCGGATCGCGATCGCGCGTGCGCTGCTGCGCGATCCCCCCATCCTGATTCTGGACGAGGCGACCAGCGCGCTCGACATGGAGTCGGAGCGCCTCGTGCAGGAGGCGATCGATCGGTTGATGGCGCACCGCACCGCGTTCGTGATCGCGCACCGCCTCGCCACGGTGCAGCACGCGGACCTGATCTTGGTGCTCGCCGAGGGGCGGATCGTGGAGCGGGGAACCCACGCCACCCTGTACGCCGCGGGTGGGCTGTACCGCCGGCTGCACGACATGCAATTCCGCACCTGA
PROTEIN sequence
Length: 601
MGRSGRLLLLLRPYTLLFVGNLVATFVASVMDGATFVLLIPFLRALFGQQALPAVGGSTIETLVAKLAGPLLATGAPQTALRRVVLVLLGALVVKNAAGYAAAMSSVAIEEGVVRDLRVRLFRHLQSLPLGFFQRTRGGQLLARIISDTDQVKTAVTAALASLVRNANLIVVYVAILFGLSWRLTLIALVLAPLLVLIIRPIVARVRRRSREQAEDRGELTSLVSEMVASVKLVRAYVAEAFEVERFQTLANRYRQRVLRAQGASTLTSPISEIFAGMVVVLIFSVGTTLALGTSASLRPEVFIAFVAVALRLMSPVKAVAQYPTIMAGAAAAADRVFEVLDLPAGEGDRPGAAPARFHDRIEYRGVSFSYDGEAPVLQDVELEVRRGQVVAIVGPSGAGKTTLVDLLPRFYEPTRGDILIDGVPIAGFTRISLRGLMGIVSQETILLNDTVLANISYGRSDFTLEQVHAAARAANAHDFVSQLPDGYRTLLGERGTRLSGGERQRIAIARALLRDPPILILDEATSALDMESERLVQEAIDRLMAHRTAFVIAHRLATVQHADLILVLAEGRIVERGTHATLYAAGGLYRRLHDMQFRT*