ggKbase home page

13_1_20cm_full_scaffold_7990_4

Organism: 13_1_20cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 3043..3372

Top 3 Functional Annotations

Value Algorithm Source
Response regulator GacA n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HST1_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 96.0
  • Bit_score: 82
  • Evalue 2.80e-13
Chemotaxis protein CheY {ECO:0000313|EMBL:ETM67007.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (st similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 96.0
  • Bit_score: 82
  • Evalue 3.90e-13
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 97.0
  • Bit_score: 80
  • Evalue 3.00e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. M1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGCCGAACCGGCGCTTCGACTTGACGTCAGCGTCGAAACCTAAGAGTCTGGGCACCATGGCGGCGACCAAGTGCCTGGTCGTGGACGACCACTCCGTAGTGCAGCAGGGCCTTGAGCTGCTGATCGGTGACATCGAGGACCTGGAGCTCGTGGGCGTCGTCGAGTCCGGGGAGGACGCGCTCGACGCCGTCGCGCGGCTGAAGCCCCAGATCGTCCTCATGGACGTGCGCCTGCCGGGAATCGACGGCGTCTCGGCCGTGAAGAAGATCCAGCAGGTCGCGCCGAGCTGTCCGACGCCCTCGCGGCCGGCGCGCGCGGGTACGTGCTGA
PROTEIN sequence
Length: 110
MPNRRFDLTSASKPKSLGTMAATKCLVVDDHSVVQQGLELLIGDIEDLELVGVVESGEDALDAVARLKPQIVLMDVRLPGIDGVSAVKKIQQVAPSCPTPSRPARAGTC*