ggKbase home page

13_1_20cm_2_scaffold_141_23

Organism: 13_1_20CM_2_Actinobacteria_65_11

partial RP 16 / 55 MC: 1 BSCG 18 / 51 ASCG 9 / 38
Location: comp(22377..23348)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|RuleBase:RU000617};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivis UNIPROT
DB: UniProtKB
  • Identity: 37.5
  • Coverage: 325.0
  • Bit_score: 220
  • Evalue 3.50e-54
ATP-dependent DNA ligase I (EC:6.5.1.1) similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 329.0
  • Bit_score: 215
  • Evalue 2.30e-53
DNA ligase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLR7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 325.0
  • Bit_score: 220
  • Evalue 2.50e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 972
ATGACGAGGGAGGTCGTCTGGGACCACGGCGTGTCACTGCCCGAGCACAGCTTGTGGCTGGACCCGCTCGTGGTTCGCGCGTTCGCCTTCATCTCGCATGCCCACACCGATCACGCGAGACGCCACAAAGAGGCGCTCCTCACCCCGCAGACGCTCGCGCTCATCCCCGAGGCGCGGCGGCCGCGGGGCTGGCGGATGCTCGGTTACGACGAGCCCATGCGACGCGGGCCGCGGGCGACGCTCACGCTGCACCCGGCCGGACACATGCTGGGCTCGGCACAGCTGCGCTTCGAGCACGACGGCACGAGCTTGCTCTACACAGGCGACATCAAGCTGCGGCAGCCGGGCGGCCGGGTCACGACCCACGTCCCGCACGCGGATGTGCTCGTGATGGAGAGCACGTACGGGCGGCCGCATTTTCGGTTTGGCGATCCCGATTCGACGGTGGAGTCGATCGCGCGTTGGTGCCGCTTGGCGCTGGCCAGCCGGGTGACTCCAGTCCTGTTGTGCCATGCGCTTGGAAAGACCGAAGAGGTAATGCTCGCCCTGGCGCCCTATGGCTTCGCGTTTGCGCTCGAGAGCCGCTGCGTTCCGTGCGCGCGCTCGTACGAGAGCGCAGGCAGCCCGCTACCGGATTGGATCGAGCTCGACGGCGACATGCTTCCGGGCCGCGTGGTGATCGCGCCTCCGGCGGGAAAGGACGAGGTCCGCCGCCTGGGCCGATACCGGACCGCGCTCGTTTCAGGCTGGGCCAAGGACGCCGAGTTCGCGCGGCTGTTCGGCGCCGACGCCACCTTCGACCTGTCTGACCACTGCGACTTCGATGAGCTCATGGAGGTCGTCGAGCGCTCAGGCGCCGACCAGGTGTACACAGTGCACGGCTACACCGAGGATTTCGCGCGCCACTTGCGCAAGCGGGGTGTGCGAGCTTCTGCGCTTGAAGCCACAGAGCAGCTGGCTCTAGCGTTATGA
PROTEIN sequence
Length: 324
MTREVVWDHGVSLPEHSLWLDPLVVRAFAFISHAHTDHARRHKEALLTPQTLALIPEARRPRGWRMLGYDEPMRRGPRATLTLHPAGHMLGSAQLRFEHDGTSLLYTGDIKLRQPGGRVTTHVPHADVLVMESTYGRPHFRFGDPDSTVESIARWCRLALASRVTPVLLCHALGKTEEVMLALAPYGFAFALESRCVPCARSYESAGSPLPDWIELDGDMLPGRVVIAPPAGKDEVRRLGRYRTALVSGWAKDAEFARLFGADATFDLSDHCDFDELMEVVERSGADQVYTVHGYTEDFARHLRKRGVRASALEATEQLALAL*