ggKbase home page

13_1_20cm_2_scaffold_2747_20

Organism: 13_1_20CM_2_Actinobacteria_65_11

partial RP 16 / 55 MC: 1 BSCG 18 / 51 ASCG 9 / 38
Location: comp(19257..20261)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RIFCSPHIGHO2_12_FULL_Verrucumicr UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 343.0
  • Bit_score: 231
  • Evalue 1.60e-57
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Mastigocladopsis repens RepID=UPI0002D47587 similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 341.0
  • Bit_score: 228
  • Evalue 9.50e-57
murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 338.0
  • Bit_score: 226
  • Evalue 1.30e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1005
GGCAGCAACGGCAAGACATCCACGAAGGAGATGGTGGCGGCGATCCTCGAATGCAAGTTCACCGTATTGCGCACAATGGGCAACCTCAACACCGAAACGGGCGTGCCGCTCACCATGCTGAACCTCGAACCCGAGCACACGGCGCTGGTCGTCGAGATGGGAATGCAGCGTGCAGGTGACATCGGCCGGCTCGCGGGGCTGGCCAGGCCATCGATTGGAATCATCACGAATATCGGCAGCGTGCACATGGAGTTCTTCGCTTCGCAGGAGCACCTCGCGCGTGGTAAGGGTGAGCTCGTGGCAGCGCTGCCTCGCGATGGGCTCGCGGTCCTGAACGCCGACGATCCGTTCTTTGCGCTCCTGTCCTCGATGTCAGGTGCTCCGGTGAACAGCTTCGGGTTGGGAGGAGGCGACCTGCGCGGCGATCACTACAAGGCAATCGCCGGCGGCGGCTGCGAGTTCGCGGTCCGCGACGTGCCCGTGCGCCTCGCGCTCGAAGGTCGCCACCAGGCGCGCAACGCTCTGGCAGGCCTCGCCGTGGGACAGTTTGCCGGCGTGAGCCTCGCCGAAGGCGCTCGCGCGCTGTCGAACGTCTTCGTGGCGCACCGCCTACAGGAACACGAGACAGCGAAGGGCGTCGTCATCGTCGACGACGCGTACAACGCCAGTCCGGAATCGATGCTGGCCGCCTTCGACACCCTCGCGGAACAGCCACGACAGGGCCGGCTGCTCGCCGTGCTGGGCGCGATGGGCGAGCTAGGCGGCCTGGCCCAGGAATCGCATCAGCGCGTCGGTCGCCGAGCCGCGGAGGTGTTCGATGCGGTCGCCGTCCTCGACAGCGAGCTCGGCCGCGTGCTCGCCCACTCCTCCGGCGGTCACCTGCTGTCCGACCGCGAGGCGGCGGTCATCTGGGTCAAGAACAACGCCCGCCGCGGCGACAGAGTGCTGGTGAAGGCTTCGCACAGCGCGGGACTCGAAGAGGTTGTGAAGGAACTCACGAAGTGA
PROTEIN sequence
Length: 335
GSNGKTSTKEMVAAILECKFTVLRTMGNLNTETGVPLTMLNLEPEHTALVVEMGMQRAGDIGRLAGLARPSIGIITNIGSVHMEFFASQEHLARGKGELVAALPRDGLAVLNADDPFFALLSSMSGAPVNSFGLGGGDLRGDHYKAIAGGGCEFAVRDVPVRLALEGRHQARNALAGLAVGQFAGVSLAEGARALSNVFVAHRLQEHETAKGVVIVDDAYNASPESMLAAFDTLAEQPRQGRLLAVLGAMGELGGLAQESHQRVGRRAAEVFDAVAVLDSELGRVLAHSSGGHLLSDREAAVIWVKNNARRGDRVLVKASHSAGLEEVVKELTK*