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13_1_20cm_2_scaffold_46_12

Organism: 13_1_20CM_2_Gemmatimonadetes_70_10

partial RP 20 / 55 BSCG 22 / 51 MC: 3 ASCG 8 / 38
Location: 9791..11248

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 500.0
  • Bit_score: 625
  • Evalue 5.00e-176
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 489.0
  • Bit_score: 725
  • Evalue 3.90e-206
RNA polymerase sigma-54 factor, RpoN similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 493.0
  • Bit_score: 649
  • Evalue 5.50e-184

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Taxonomy

RBG_16_Acidobacteria_68_9_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
ATGAAGACCGGCCTGCACCAGCACCAGGTCCTGAAACAGGAGCTGCGGATCAATCCGCGGCTCTACCAGGCCATGGACCTGTTGTACATGCCGCTCCTCGACCTCCAACAGCACTTGAAGCAGGAGCTGCTCGGCAACCCGTTCCTCGAGCTCCTTGAGCCCGAGGAGGAGCAGGAACCCGTCGTCGCGGAGCCGAAGCCGGAGAAGGAGAAGACGGGGGACGACGAGCCGGACTGGGAGAAGATCCTGCTCGACAACGGGTCCGACTCGACGTCGTCCGGCGTGCGCGACCTCAGTGAATCCAGCGAGTACGTCGAGCCGGTTTCCGTCCAGTCCAAGGACCTGGACGACTACCTGCGCGAGCAGGTCCAGATGCTCGACCTGACGCCGCGCCAGCACCTGCTCGCCGAGGAGTTCCTCGGCAACATCGGCGAAGACGGCTACCTCCAGGCGCCGCTCGAGGAGATCGTCCGCGGCGTGAACCAGGTCCTCCACGAGCACGCCGACAAGATCGAGGGGGACGTGGACGTCCCGGAGTACACGCTCCAGGACGCGGGGGAGATGCTGCGCATCATCCAGACGCTCGACCCACCGGGGGTGGGCGCCCGGGACCTGCGCGAGTGCCTGCTGTTGCAGCTGGAGCAGCAGAAGCGCCAGGACACGCTCGCCTACCGGCTGGTGAAGGAAGCATGGGACGACCTCAAGGCCCATCGCTGGAGCGAGCTGGGGAAGCGCTTCGGTCTCGAGGCCGAGGAGGTCCAGAAGGCCGCCGACGACATCGCCAAGCTGGACCCCAAGCCCGGGCTCCAGCACTCCGCCTCGAACGACCAGTACATCATCGCTGACCTCGTCGTCCAGAAGATCGACGACCGCTACCACGTGTTCCTGAACGACCAGGGATTGCCACGCCTGCGGCTCTCCAAGACGTACCTGGACATCGCGCGCGACAAGAAGCAGTTCCAGGGCGAGAACAAGGAGTTCATCAGCCAGCGGCTCAACAGCGCGCAGTGGATGATCCAGGCGATCGAGCAGCGCCGCCAGACGATGCTCAAGGTGATGAACTTCATCGTGGACCGGCAGCGCGAGTTCTTCGAGAAGGGGATCGAATACCTGAAACCCTTGACCCTGCGCGAGGTCGCCGACGTCATCAACATGCACGAGAGCACCGTCAGCCGGGTGACCAACGAGAAATACGTGCAGACGCCGCGGGGGCTCCTGCCGCTCAAGTTCTTCTTCTCGAGCGGCCTCTCGACCTCCACCGGCGAGGATGCGAGCGCCCGGTCCATCAAGGCGCAGATCGAGAAGCTGGTCGCGGACGAGGATCCCAAAAACCCGCTGACCGACCAGCAGATCGTCGAGGAGTTCGCGAAACGGGGCGTCAAGATCGCCCGGCGCACCGTCGCCAAGTACCGCGATCAGCTGAACATCCTCCCCGCGCGGATGCGCAAGCGGCTGTGA
PROTEIN sequence
Length: 486
MKTGLHQHQVLKQELRINPRLYQAMDLLYMPLLDLQQHLKQELLGNPFLELLEPEEEQEPVVAEPKPEKEKTGDDEPDWEKILLDNGSDSTSSGVRDLSESSEYVEPVSVQSKDLDDYLREQVQMLDLTPRQHLLAEEFLGNIGEDGYLQAPLEEIVRGVNQVLHEHADKIEGDVDVPEYTLQDAGEMLRIIQTLDPPGVGARDLRECLLLQLEQQKRQDTLAYRLVKEAWDDLKAHRWSELGKRFGLEAEEVQKAADDIAKLDPKPGLQHSASNDQYIIADLVVQKIDDRYHVFLNDQGLPRLRLSKTYLDIARDKKQFQGENKEFISQRLNSAQWMIQAIEQRRQTMLKVMNFIVDRQREFFEKGIEYLKPLTLREVADVINMHESTVSRVTNEKYVQTPRGLLPLKFFFSSGLSTSTGEDASARSIKAQIEKLVADEDPKNPLTDQQIVEEFAKRGVKIARRTVAKYRDQLNILPARMRKRL*