ggKbase home page

13_1_20cm_2_scaffold_531_6

Organism: 13_1_20CM_2_Gemmatimonadetes_70_10

partial RP 20 / 55 BSCG 22 / 51 MC: 3 ASCG 8 / 38
Location: comp(5891..6607)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase Rsu; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 244.0
  • Bit_score: 316
  • Evalue 2.70e-83
Pseudouridine synthase n=1 Tax=Thermus thermophilus JL-18 RepID=H9ZP40_THETH similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 239.0
  • Bit_score: 205
  • Evalue 8.00e-50
pseudouridine synthase Rsu similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 243.0
  • Bit_score: 238
  • Evalue 1.40e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 717
ATGACGTTGATGCGCCTGCAGCGCGCCCTGGCGCGCGCGGGCGTGACCTCCCGGCGCAAGGCCGAGGAGCTGATCCGCGCCGGCCGCGTGAAGGTGGACGGCGCGGTCGCCGTTTTGGGCCAGTCGGTCGACGCGGAACGCCAGCGGGTCACCGTGGACGGCCGCGTGGTGCGGCCCGCCCGCACGGTCTGGCTGGCGCTCAACAAGCCGATCGGGTACGTGGTGAGCCGCGGGGACCCCGAGGGCCGGCCCACGGTCTTCCACCTCCTCCCCAAGGTGCCCGGGCTCACGTACGTTGGACGCCTGGACGTCATGACGTCCGGCCTGCTGCTGTTGACGACGGACGGGGCGGCGGCGCACCGGCTCATGCACCCGCGCTTTGCCGTGCCGCGCACCTACTGGCTCGGCGCGCACGGGCTGGCGGCGACCGCGGTGCAGCACGCCCTCACCGGCCGCATTGTCCTGGACGATCGGCCGGTGAAGGTCCTCGCGAGCCGCGTGCGGCCGGCCGGGAAGAGCGTGGAGGTCGAGGTGACGCTGGCGGAGGGACGGCAGCGCGTCGTGCGCCGCCTCGCCGAGCAGCTGGGGCTGAAGGTAGAATGGCTGCACCGCGTCGCGTACGGTCCCGTGCGCTTGGGGAAGCTGCCCGAAGGCCGGCACCGCGCCCTCACCCCACATGAGATCCGCGAGATCGAGCGATTGCATGGACCTGCGTGA
PROTEIN sequence
Length: 239
MTLMRLQRALARAGVTSRRKAEELIRAGRVKVDGAVAVLGQSVDAERQRVTVDGRVVRPARTVWLALNKPIGYVVSRGDPEGRPTVFHLLPKVPGLTYVGRLDVMTSGLLLLTTDGAAAHRLMHPRFAVPRTYWLGAHGLAATAVQHALTGRIVLDDRPVKVLASRVRPAGKSVEVEVTLAEGRQRVVRRLAEQLGLKVEWLHRVAYGPVRLGKLPEGRHRALTPHEIREIERLHGPA*