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13_1_20cm_2_scaffold_4_21

Organism: 13_1_20CM_2_Crenarchaeota_53_14

partial RP 32 / 55 MC: 4 BSCG 12 / 51 ASCG 23 / 38 MC: 2
Location: 17504..18322

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp42 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AH19_PYRYC similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 266.0
  • Bit_score: 279
  • Evalue 5.00e-72
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 Tax=RBG_16_Archaea_50_20_curated UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 271.0
  • Bit_score: 351
  • Evalue 1.10e-93
exosome complex RNA-binding protein Rrp42 similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 266.0
  • Bit_score: 279
  • Evalue 1.40e-72

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Taxonomy

RBG_16_Archaea_50_20_curated → Archaea

Sequences

DNA sequence
Length: 819
TTGTCCGCAACCCCACAACTCCCTCCTGTAGCAAAGCTCGAACAGAAAACGGTCATTGACCTGGTTGCCAAAGGGAAGAGAATCGACGAGCGCGGGCCTGAGAGTTACCGACCGATCCAAATACAAGTAGGTCTCATAGAGAAGGCTAACGGTTCCGCACAGGTCCATCTCGGCAAGTCAAAGGTCCTGGCCGGGATCAAGGTCCAGACAGGCACACCGTTTCCGGACACTCCGGACGAAGGAGTTCTTACGGTCAACGCCGAACTCGTCCCCCTAGCATCCCCATCCTTCGAAGCAGGCCCTCCAAGCGAAGCCGCCATCGAACTCTCTAGAGTCGTGGACAGAGGCATCAGAGAATCCAAGGCTCTCGACATGAAATCACTCGTACTTCAAAAGGGTAAGACAGTTCAGGCCGTCTATGTTGACATCTACGTTCTCGACCATGATGGCAACCTCATAGACGCAGCTTCTATGGCAGCGCTCGCGGCACTCGTAAACTCGAAGGTTTCCAAGATGGAGGTCAAAGGCGACGAGGTAATCAATAAAGGCGGGCATCACCAACTACCGCTTAACAACTACCCAGTCGCCGTCACATTCGCCAAGGTCGACCGGACAATAATAGTCGATCCAAGTCTGGAAGAAGAACAAGTGATGAACGCAAGACTAACGGTGACAATAGACAAGAACGGGGATATCTGCGCCATGCAGAAGGGCGGACTCTACGGATTTACCCCAGACGAAGTACGGAAGGCTGTCCATATGGCCGTTGGCAAAGCGGCCGAGAACCGGGCCAGGATAATGGCCGCGGCGAAGGGCTGA
PROTEIN sequence
Length: 273
LSATPQLPPVAKLEQKTVIDLVAKGKRIDERGPESYRPIQIQVGLIEKANGSAQVHLGKSKVLAGIKVQTGTPFPDTPDEGVLTVNAELVPLASPSFEAGPPSEAAIELSRVVDRGIRESKALDMKSLVLQKGKTVQAVYVDIYVLDHDGNLIDAASMAALAALVNSKVSKMEVKGDEVINKGGHHQLPLNNYPVAVTFAKVDRTIIVDPSLEEEQVMNARLTVTIDKNGDICAMQKGGLYGFTPDEVRKAVHMAVGKAAENRARIMAAAKG*