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13_1_20CM_2_Archaea_63_93

13_1_20CM_2_Euryarchaeota_63_93

In projects: 13_1_20CM_2 | AMO_Archaea | diaphorachaeota | archaea_ggkbase | meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Euryarchaeota → Archaea

Metagenomic Context

Parent: 13_1_20CM_2_UNK Curated version: 13_1_20CM_2_Archaea_63_93_curated

Properties

Avg. coverage: 92.97 Longest contig: 13.00 Kbp Bin length: 341.66 Kbp GC content: 63.04 %

Contigs count: 117 Features count: 463 rRNAs count: 0 tRNAs count: 5

Genome completeness

partial RP 1 / 55 BSCG 2 / 51 ASCG 0 / 38

Displaying items 101-117 of 117 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_20cm_2_scaffold_97425	3	1715 bp	64.02	81.67	97.78
13_1_20cm_2_scaffold_31726	5	2874 bp	62.21	97.64	98.02
13_1_20cm_2_scaffold_29970 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	2951 bp	66.66	109.47	98.20
13_1_20cm_2_scaffold_48322 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	4091 bp	61.99	82.15	98.85
13_1_20cm_2_scaffold_227272 Phylum: Euryarchaeota (100%)	3	1141 bp	66.43	94.59	98.86
13_1_20cm_2_scaffold_43486 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	2497 bp	64.52	95.60	98.88
13_1_20cm_2_scaffold_87387 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	1806 bp	67.17	112.02	99.67
13_1_20cm_2_scaffold_266347 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1047 bp	62.56	82.95	99.71
13_1_20cm_2_scaffold_74583 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	6	2454 bp	66.95	83.56	99.76
13_1_20cm_2_scaffold_126510	1	1512 bp	64.42	90.64	99.80
13_1_20cm_2_scaffold_179546	1	1280 bp	68.28	84.12	99.84
13_1_20cm_2_scaffold_96202	6	2445 bp	61.76	105.74	99.88
13_1_20cm_2_scaffold_89996 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	1781 bp	65.64	91.46	99.89
13_1_20cm_2_scaffold_70932 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1995 bp	68.07	92.47	100.00
13_1_20cm_2_scaffold_294022	3	1619 bp	63.37	100.15	100.18
13_1_20cm_2_scaffold_41967 Phylum: Euryarchaeota (66.67%)	3	2536 bp	64.00	92.54	100.32
13_1_20cm_2_scaffold_203329	3	1204 bp	66.69	90.06	100.42

Displaying items 101-117 of 117 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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