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13_1_20cm_2_scaffold_81274_4

Organism: 13_1_20CM_2_Acidobacteria_55_9

partial RP 10 / 55 MC: 2 BSCG 4 / 51 ASCG 1 / 38
Location: 2066..2836

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CSQ6_PAESJ similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 254.0
  • Bit_score: 284
  • Evalue 1.10e-73
RNA polymerase sigma70 factor {ECO:0000313|EMBL:KIL39894.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.; UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 256.0
  • Bit_score: 297
  • Evalue 1.80e-77
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 254.0
  • Bit_score: 284
  • Evalue 3.20e-74

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Taxonomy

Paenibacillus sp. VKM B-2647 → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 771
ATGGGACAGCGTTTGGTGCGTGCCAAGACCAAGATCCGTGACGGCGGTATCCGTTTCGAAGTGCCGGAGCGACGTGCACTCCGGCGGCGGCTGGATGCGGTCCTTGAAGCGATTTACGCTGCGTTTGGCATTGGCTGGGACGACATGGCGGGCGCCGATCAGCACGGCCGCGGTCTCGCCGAAGAAGCCATCTGGCTCGCGAGAGTTCTTCTTGAGCAAATGCCTGGCGAAGCAGAGGTTCAAGGATTGTTGGCGCTCATGCTCCACTGTGAAGCGCGGCGCGCCGCCCGGCGCGATCAAGATGGCCGTTACGTTCCTCTTTCCGAGCAGGATCCGAAACTGTGGTCGCTCCCTTTAATAGAAGAGGCGGAGCGCTATCTCGCAGAGGCGTCCAAATATGGGCGCCCAGGACGTTTTCAACTGGAAGCGGCAATTCAGTCGGTACATGCTGAACGGGCACGCGGCCGCCGTGTTGAGTGGAAAGCGATTGTTCAGTTCTACGCACAGCTGATCCGCATATCGCCGACAATCGGCCGGCAAACTGGATATGCCGCCGCTCTTGCCGAAGCAAGTGGACCGGAACAGGGCCTCGCAGTTCTGGATGCACTCGATCGGGATGTAGTCTCTGCTTATCAACCCTATTGGGCGGTTCGCGCGCATCTGCTACAACGCCTGGGAAGAACTGCTGACGCTTCAGACGCTTACGACCGAGCCATCGGCCTGGCTGAAGATCCAGCTATAAGGCAGTTCCTGCTCAAAAAACGGGGCTGA
PROTEIN sequence
Length: 257
MGQRLVRAKTKIRDGGIRFEVPERRALRRRLDAVLEAIYAAFGIGWDDMAGADQHGRGLAEEAIWLARVLLEQMPGEAEVQGLLALMLHCEARRAARRDQDGRYVPLSEQDPKLWSLPLIEEAERYLAEASKYGRPGRFQLEAAIQSVHAERARGRRVEWKAIVQFYAQLIRISPTIGRQTGYAAALAEASGPEQGLAVLDALDRDVVSAYQPYWAVRAHLLQRLGRTADASDAYDRAIGLAEDPAIRQFLLKKRG*