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13_1_20cm_3_scaffold_10894_2

Organism: 13_1_20CM_3_Gemmatimonas_aurantiaca_60_15

partial RP 35 / 55 MC: 1 BSCG 30 / 51 ASCG 8 / 38 MC: 1
Location: 2969..4366

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 385.0
  • Bit_score: 713
  • Evalue 1.50e-202
rpoC; DNA-directed RNA polymerase beta' subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 385.0
  • Bit_score: 713
  • Evalue 3.00e-203
DNA-directed RNA polymerase subunit beta' n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N8_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 385.0
  • Bit_score: 713
  • Evalue 1.00e-202

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1398
ATGATTGATTTCCGCAGCGTGCGCGATGCTCGCGCATCGGCGTTCGATTTCATTCAAGTCCGAATCGCTTCGCCAGAAGAGATTCGGGGACCCAAGGACCAGAAGGAGCGCGAGCGCTTGGAGATGGCCGGCGTGCGCAACTGGTGGTCCTGGGGCGAGGTCACGAAGCCCGAGACGATCAACTACCGCTCGTTCAAGCCGGAGAAGGACGGCTTGTTCTGCGAGCGTATTTTCGGCCCGGTGAAGGACTGGGAGTGTCATTGCGGCAAGTACAAGCGCATTCGCTATCGCGGCGTGATCTGCGATCGCTGCGGCGTCGAGGTGACGCTCTCCAAGGTGCGCCGCGAGCGCATGGGGCACATCGAGCTCGCGGTGCCGGTGGCGCATATCTGGTTCTTCAAGACGCTGCCGAGCCCGATGGGCAATTTGCTCGATGTCACTCTGCGTGACCTCGAGAAGGTCATCTACTACTCGAATTACATCGTCATCGAGCCTGGAGAGCAGGAGGTCTCGTCGGGTCAGTTGCTGGACGAGGACGAATACCTCGCGCTGCGCACGAAGGCGAAGGAAGAGAACGACGCAGCATTCCAGGCAGACATCGGCGCGCCGGCGGTTCGCGAGCTGCTGCGCCGTCTCGACGTCGACACGCTCGCCGACACCCTCCGTGCCGATGTGGCCAATGAGACGTCACAGCATCGCAAGAAGATGCTGCTCAAGCGGCTCAAGATCGTCGACGCATTCCGGAACTCCGGCGAGAGCGGCGACGCACGCAACCGTCCAGAGTGGATGATTCTCGACGTGATTCCGGTGATTCCGCCGGATCTGCGTCCGCTCGTGCCACTCGACGGCGGCCGGTTCGCGACTTCCGATCTCAATGACCTCTATCGGCGCGTCATCAACCGCAATAATCGGCTCCAAAAGCTGATTATGCATCGTGCACCGGAAGTCATTCTCCGGAACGAGAAGCGCATGCTGCAGGAGGCCGTCGACGCGTTGTTCGACAACGGGCGTCGCTCGAAAGCGATTCGGGGCCGCGGTAAGCGTCCGCTCAAGTCGCTTTCGGACATGCTCAAGGGCAAGCAGGGCCGGTTCCGTCAGAACCTGCTCGGCAAGCGCGTCGACTACTCGGGACGTTCGGTGATCGTCGTCGGCCCCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAAGATCGTCGAGCGCGAGTCACCGGAAGTCTACGAGATCTTGGAAGAGATCATCCGCGACCACCCGGTTCTGCTCAATCGCGCGCCGACGCTGCACCGGTTAGGCATCCAGGCGTTCGAGCCCGTGCTCGTCGAGGGCAAGGCCATTCGAATCCATCCATTAGTCTGCGCTGCGTTCAACGCCGATTTTGA
PROTEIN sequence
Length: 466
MIDFRSVRDARASAFDFIQVRIASPEEIRGPKDQKERERLEMAGVRNWWSWGEVTKPETINYRSFKPEKDGLFCERIFGPVKDWECHCGKYKRIRYRGVICDRCGVEVTLSKVRRERMGHIELAVPVAHIWFFKTLPSPMGNLLDVTLRDLEKVIYYSNYIVIEPGEQEVSSGQLLDEDEYLALRTKAKEENDAAFQADIGAPAVRELLRRLDVDTLADTLRADVANETSQHRKKMLLKRLKIVDAFRNSGESGDARNRPEWMILDVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLQKLIMHRAPEVILRNEKRMLQEAVDALFDNGRRSKAIRGRGKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPXXXXXXXXXXXXXXXXXEDRRARVTGSLRDLGRDHPRPPGSAQSRADAAPVRHPGVRARARRGQGHSNPSISLRCVQRRF*