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13_1_20cm_3_scaffold_18333_2

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(144..1643)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Rhodococcus opacus RepID=UPI00029CBD13 similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 319.0
  • Bit_score: 458
  • Evalue 8.50e-126
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;" UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 318.0
  • Bit_score: 475
  • Evalue 1.20e-130
RNA polymerase sigma-70 factor family protein similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 318.0
  • Bit_score: 475
  • Evalue 2.50e-131

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Taxonomy

Kutzneria albida → Kutzneria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
ATGGCGATGACCCAGAGCTCGGTGGGCGACGACTTCCTGCGGCTGGCCGACCCGTACCGGCGGGAGCTGCTCGCGCACTGCTACCGCATGCTCGGCTCGGTGCACGACGCGGAGGACCTGGTGCAGGAGACCTACCTGCGCGCGTGGCGCTCGTACGACCGGTTCGAGGGCCGCTCCTCGCTGCGCACCTGGCTGCACACCATCGCCACCCGGGCCTGCCTGACCGCGCTGGAGAGCCGCAGCCGGCGGCCGCTGCCGACCGGCCTGGGCAACCCGAGCGGCGACCCGACCGACGACCTCGTCCAGCGCACCGAGGTGCCGTGGCTGGAGCCGGTACCGGACGTGCTCGTCGGGGCCGAGGGCAACGATCCGGCCGCGATCGTGACCTCGAAGGAGAGCATCCGCCTCGCGCTCATCGCCGCGCTGCAGCACCTCCCGCCCCGGCAGCGCGCCGTGCTGATCCTGCGCGACGTGCTGCAGTGGAAGGCGGCCGAGGTCGCCGAACTGCTCGACACCACGACCGTCGCGGTCAACAGCACCCTGCAACGCGCCCGGGCGCAGCTCGACCAGGCGTCGCCGAGCGAGGACCAGATACAGGAACCCGAGGCGGCGGAGACGCGGGAGCTGCTCGACCGCTACGTGGCGGCGTTCGAGGACAAGGACATCCAGCGGATCGTCGACCTGTTCACCAAGGACGCGGTGTGGGAGATGCCGCCGTTCGACGCGTGGTACCAGGGCGCGGAGACCATCGGGCGGCTCGTCGACACGCAGTGCCCGGCGCGCGGCCCCGGCGACATGCGGCTGCTGCCGACCTCGGCCAACGGCCAGCCGGCGTTCGGGCTCTACATGCTCGGCGCGGACGGCGTGCACCGGCCGTTCCAGCTGCACGTGCTGCAGCTGCGCGGCGGCGAGGTCGAGCACGTGGTGTGCTTCTTCGACATCACGCTGCTGGAACGCGCGATCAACTACCTGCTCGGCAGCCTGCTGCTGGTCACGCCCGAGACGCTGGCCCGGCCCACGCCGTGCGCCGGCTGGGACCTTCGGGCGCTGCTCGCCCACCTCGACGACTCGCTCAGCGCGCTGACCGAGGCCGTCGAGGCCGGCGCGGTCGGTCCCGCCGGCGGGCCGCGGGCCACCGGAGAACCCTCGACGGTACGGGCAGCCGCCACGCACCTGCTCGGCGCGCTGGCCGGGGCCCGGTACCGGGTCGAGGTGTCCGTCGGCGGCCGCCCGCTCACCACGGCGATCGTGGCCTCGACCGGCGCGGTCGAGGTCGCCGTGCACGGGTGGGACGTGGCCCAGGCCTGCGGAGCGGACCGGCCGATCCCCGAGGCACTCGCCGACGAGCTGCTCGACCTGTGCGCGTTGCTGGTCACCGACCTCGACCGGCCGGCGCGCTTCGCCACCGCGGTCGCCGTGTCCCCCCGCGCCGATCCCGGGGACCGGCTGCTGGCGTTCCTCGGGCGCAAGCCGTACCCGCTGATTTCGCGCGCGGCGTAA
PROTEIN sequence
Length: 500
MAMTQSSVGDDFLRLADPYRRELLAHCYRMLGSVHDAEDLVQETYLRAWRSYDRFEGRSSLRTWLHTIATRACLTALESRSRRPLPTGLGNPSGDPTDDLVQRTEVPWLEPVPDVLVGAEGNDPAAIVTSKESIRLALIAALQHLPPRQRAVLILRDVLQWKAAEVAELLDTTTVAVNSTLQRARAQLDQASPSEDQIQEPEAAETRELLDRYVAAFEDKDIQRIVDLFTKDAVWEMPPFDAWYQGAETIGRLVDTQCPARGPGDMRLLPTSANGQPAFGLYMLGADGVHRPFQLHVLQLRGGEVEHVVCFFDITLLERAINYLLGSLLLVTPETLARPTPCAGWDLRALLAHLDDSLSALTEAVEAGAVGPAGGPRATGEPSTVRAAATHLLGALAGARYRVEVSVGGRPLTTAIVASTGAVEVAVHGWDVAQACGADRPIPEALADELLDLCALLVTDLDRPARFATAVAVSPRADPGDRLLAFLGRKPYPLISRAA*