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13_1_20cm_3_scaffold_28667_3

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(1612..2037)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 85.0
  • Bit_score: 61
  • Evalue 1.60e-06
Ribonuclease VapC n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B1R6_FRADG similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 85.0
  • Bit_score: 62
  • Evalue 3.90e-07
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 85.0
  • Bit_score: 61
  • Evalue 3.20e-07

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Taxonomy

Frankia symbiont of Datisca glomerata → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 426
GTGATCTACCTCGACTCCTGCGCGCTGGTGAAACTGGTGACCCCGGCGCCGGAAACCCCGGCGCTGGAACGGTATCTGCGCGAGCACGCCGCCGAGCACCACGTGGCCAGCGCCCTGGTCCGCACCGAGGTACGCCGGGCCCTGACCCGGGTCTCCGCCACCGCCAGGCAACGGAGTACGGCCGACAAGCTGCTCGACGCGGTCATCACCATCTCGATCACCGACGACCTGCTCGACGAGGCGGGGCGGCTGCCCGCGGCTACTGGCCGCCGCCGAGCGAGCCGGGCTGGCTACCGCCGCACCGCGCTGATCCGGCGTGGCGTACCGTATCGGCGGTTTACGAATGATGGATGTCGATGCCGCGAAAGCTTGACGGTCGGCGTCCGCAGTCCTAAGGTTCGGGCAACTATAAGGAAACCTACCTAA
PROTEIN sequence
Length: 142
VIYLDSCALVKLVTPAPETPALERYLREHAAEHHVASALVRTEVRRALTRVSATARQRSTADKLLDAVITISITDDLLDEAGRLPAATGRRRASRAGYRRTALIRRGVPYRRFTNDGCRCRESLTVGVRSPKVRATIRKPT*