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13_1_20cm_3_scaffold_34_15

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(14600..15325)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Nocardiopsis alkaliphila RepID=UPI0003474729 similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 251.0
  • Bit_score: 160
  • Evalue 3.00e-36
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:AFR08910.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis a UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 239.0
  • Bit_score: 159
  • Evalue 7.20e-36
bacterial regulatory s, tetR family protein similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 239.0
  • Bit_score: 159
  • Evalue 1.50e-36

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Taxonomy

Nocardiopsis alba → Nocardiopsis → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 726
GTGACCACCGCGGCCACCGTATCCGGGCGGCCGTTGACCAGGCGGGAGCGGCTGCGCACGGCGACGCTGGCCGAGATCAAGGAGATCGCGCGGCGCCGGCTGATCGAGGACGGCTCGGCCCGGGTCTCGTTGCGGGCGATCGCGCGGGACATGGGGATGACTCCGGCCGCGCTCTACCGGTACGTCCCCGGGATCGAGGCACTGGTCGAGGCGATCCTCGCGGACGTCCGCGAGGAAGCGGCCAGGGCACTGGAGGAGGCCCGGGACGCGGCCGACCCGACCGATCCGTTGGCTCAGCTGACCACCCTGGGCCGGGCCCTGCGCAGCTGGGTACTGTCGCACTCCGCCGAGTTCGCCCTGGCGCTCGGCGAGTACGGCCGGCACACGCCCGACCCCGAGCGGCCGGGCGTCGACGACCGGCTGGTGCCGGCGTACCGCGAGCTGTTCCTCGCGACCGTGACCCGGCAGTGGCAGCGGCGGCCGTTCCCCATGCCGCCCGACCTCGACCCCGAGCTGGCTGGCCCGCTGACCGCGGTCGCCGAGCGGGTCGGCTGCACCCTGCCGCTGCCCGCGCTGTACGTGGCGCTGCGCTGCTACGGCCGGGTCTGGGGCGCCATCCTCGTCGAGGTCTCCGGTCACCTGCCGGTGGATGTCGACGGTGCCGGGGCGCTGTTCGAGGCCGAGCTGGCCGATACCGTCCGGTGCTTTCGCGGTCCGCACGATTGA
PROTEIN sequence
Length: 242
VTTAATVSGRPLTRRERLRTATLAEIKEIARRRLIEDGSARVSLRAIARDMGMTPAALYRYVPGIEALVEAILADVREEAARALEEARDAADPTDPLAQLTTLGRALRSWVLSHSAEFALALGEYGRHTPDPERPGVDDRLVPAYRELFLATVTRQWQRRPFPMPPDLDPELAGPLTAVAERVGCTLPLPALYVALRCYGRVWGAILVEVSGHLPVDVDGAGALFEAELADTVRCFRGPHD*