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13_1_20cm_3_scaffold_7597_8

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 7089..7727

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5E4N5_NOCAS similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 206.0
  • Bit_score: 255
  • Evalue 4.70e-65
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAD81655.1}; TaxID=1110697 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides N UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 206.0
  • Bit_score: 255
  • Evalue 6.50e-65
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 211.0
  • Bit_score: 253
  • Evalue 6.50e-65

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Taxonomy

Nocardia asteroides → Nocardia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGCTGGCATCCGACGAGGAGCTCGTGGGCCGGCTCCGGGGCGGGGACGGGACGGCGTTCGCGGCCCTGCTGGACGCCTGGTCGCACGGGATGCTTCGGGCGGCGCGCGGCTATGTGGCGAGCGAGGAAGCCGCCGAGGACGTGGTCCAGGAGACCTGGCTCGCGGTCATCCGGGGCATCGACCGCTTTGAGGGTCGCTCGTCGCTACGGACCTGGGCGTACCGGATCCTCGTCAACATCGCGAAGACCCACGGCGTTAAGGACAGCCGCACCGTGGCCTGGTCCAGCCTGGGGCCGGAGGACCAGGGCCCGACGGTCGACCCGGACCGCTTCCGCGGACCCGATGACCCGTACCCGGGGCACTGGCGGCGCTTCCCCGACCCGTGGCCGCCGCCGTCGCCGGAGTCCGAGGTGGTCTCCCGCGAGGTCCGGTCCCTCGTCGAGGCGGCGGTGGCCGGCCTGCCGCACCGGCAGCGTGTGGTGATCACGTTGCGGGACATCGACGGGTACACCTCGGAGGAGGTCTGCGCGATCCTCGGGGTCAGCGCGGCGAACCAGCGGGTGCTTCTGCACCGCGCCCGGGCCGCCGTCCGTGGCCGGCTGGAGCAGTACTTCACCGCCGAGGGGGTACGGCGATGA
PROTEIN sequence
Length: 213
MLASDEELVGRLRGGDGTAFAALLDAWSHGMLRAARGYVASEEAAEDVVQETWLAVIRGIDRFEGRSSLRTWAYRILVNIAKTHGVKDSRTVAWSSLGPEDQGPTVDPDRFRGPDDPYPGHWRRFPDPWPPPSPESEVVSREVRSLVEAAVAGLPHRQRVVITLRDIDGYTSEEVCAILGVSAANQRVLLHRARAAVRGRLEQYFTAEGVRR*