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13_1_20cm_3_scaffold_483_18

Organism: 13_1_20CM_3_Acidobacteria_58_11

partial RP 15 / 55 MC: 2 BSCG 12 / 51 ASCG 5 / 38
Location: 18142..18717

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C92_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 185.0
  • Bit_score: 203
  • Evalue 1.90e-49
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 188.0
  • Bit_score: 210
  • Evalue 2.20e-51
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 185.0
  • Bit_score: 203
  • Evalue 5.30e-50

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGCTGGACGTGAAGGCGGGTGACGAACAGTCGTTCGCGCTGCTGCTCCATCGCTACAGGACTCCACTGGTTAATTTCCTGTATCGGATGGTGCGGAACCGAGAACAGGCGGAAGATCTGGCGCAGGAAGTTTTTTTGCGAATGTACCGCGCGCGGGAAGACTACGTGCCGAGCGCGAAGTTCACTACCTGGCTTTTCCGGATCGCGACAAATCTGGCGTTAAATTCGGTACGGGACAACCGTTACCAGCGGATGGAAATCTCACTGGATGCACCGGTGACGGCGGATGCCGAGGACGGCGAGGAGAAGAAGCTGGATGTTGCCGAGATGCACCCGAACATCGAGCAGCACCTGATCGAGGAGACGCGGCGGAAAATGATCCGGCGGGCCATTGAAAAGCTTCCGGAGAAGCAGCGCGCGGCGGTGCTGCTGCACAAGTATCAGGAGCTGGACTACGGAGAGATTTCGAAGATCCTGGAATGCTCGGAGAGCGCGCTGAAATCGTTGCTCTTCCGTGCGTATGAAACGCTGCGAGTGGAACTAGCCCCCCTCGTGGCGCAACGGGCCGCGCAATAG
PROTEIN sequence
Length: 192
MLDVKAGDEQSFALLLHRYRTPLVNFLYRMVRNREQAEDLAQEVFLRMYRAREDYVPSAKFTTWLFRIATNLALNSVRDNRYQRMEISLDAPVTADAEDGEEKKLDVAEMHPNIEQHLIEETRRKMIRRAIEKLPEKQRAAVLLHKYQELDYGEISKILECSESALKSLLFRAYETLRVELAPLVAQRAAQ*