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13_1_20cm_3_scaffold_2136_1

Organism: 13_1_20CM_3_Actinobacteria_68_9

near complete RP 43 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 9 / 38
Location: 2..2758

Top 3 Functional Annotations

Value Algorithm Source
CpaF n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L013_THERP similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 295.0
  • Bit_score: 401
  • Evalue 3.00e-108
type ii secretion system integral membrane subunit; K12510 tight adherence protein B Tax=RBG_16_Actinobacteria_68_12_curated UNIPROT
DB: UniProtKB
  • Identity: 37.4
  • Coverage: 629.0
  • Bit_score: 408
  • Evalue 3.40e-110
protein CpaF similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 295.0
  • Bit_score: 401
  • Evalue 8.40e-109

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2757
AACGACGAATCGCATCTGCGACGCATCATCAACAAGATCGTCGCGCAGGTCGGTCGGCGCGTGGACGAGTCCTCGCCGATGGTGGACGCGCGCCTCCCGGATGGCAGCCGCGTGAATGCCGTGCTTCCTCCTCTGTCGCTGTCAGGCCCACTCGTGACGATCCGCAAGTTCGGGAACAAGCGCTGGGGCCTTGACGACCTGATCCGGCTCGGCACGCTCAGCCGCGAAACCGTCGACTTCTTCGAGCAGTGCATCAGAGCAGAGCTGAACGTCCTCATCTCGGGCGGCACGGGTTCCGGTAAGACGACCCTGCTGAACGCGATGTCGACGGCGATCCCGAACGAGGATCGCATCGTCACGATCGAGGACGCGGCCGAGCTGCGGCTCAACCAGCGGCACGTCCTTCGACTCGAGGCGAGGACCAAGAACATCGAAGGCGAGGGTGAGATCCCAATCCGCGAGCTCGTTCGCAACTCGCTTCGCATGCGTCCCGACCGCATCATCGTCGGCGAGGTCCGCGGAGCCGAGGCACTGGACATGCTTCAGGCGATGAACACCGGCCACGACGGGTCGCTGTGCACCGTCCATGCGAACAGCCCCCGCGATGCGCTCGCGCGCATCGAGACCATGGTGTTGATGGCGGGCTACGACCTGCCCGTGCGCGCGATCAGGCAGCAGGTGGCGTCAGCGCTCGATCTGATCGTGCATCTCGAGCGGCTCCAGGACGGGTCGAGGCGGGTCACCGCGATCACCGAGGTCCAGCGCATGGAATCCGACGTGATCACGCTGCAGGACATCTTCACCTTCAAGGTCGAGAGCGTCACGTCGAACGGCGTTGTGCTCGGCAAGCTCACGCCGACGGGCCTGCGGCCGACGTTCCAGGAGGGGAGTCGCCCGATGAGGCGATTTCGTCTGCTGCCCCTGCTCGTCTTCCTCCTGCTCGCGCCGCCGGCGGCGGCTGCCGGCCCGAGGTTGACACGTACGAGCGAGACCGAGTTCCCCGGACGCTCATACGTTCTTTCCCTGCCAAGGGCAGAGACGATCTCCCCCTCAGCGGTGCAGGTGCGCGAAAACGGGCGGCCCGTCCCGAATCTTTCGGTGCTGCCTGCCAATACCGCGGGCACGAAGGAGCTCGCCGTCGTGCTTGTGATCGACACGAGCGGCAGCATGCGCGGCGCGCCGATTCGCGGAGCGGTCGCGGCAGCCCGTGTGTTCGCGAGCCATCGCAACCCGCAACAGCAGCTCGGAATCGTGGAGTTCAACGGCGCCGTCCGGACCGCGTTGCCGCTCACGACCAACCAGGTCGCGATCGAGCGCGCGCTGAAGTCCGCCCCGCCCCTAGGGCGCAACACCCACGTCTACGACGCGGTGCAAACGGCTCTCGGAATGCTCAAGGCGGGTCACATTGCCGGCGGCGCGATCGTGCTCCTGTCGGACGGCGCCGACACTGGCAGCGTGGCCACTACGGCCGCCGTCCAGAGCGCCGCCCAAGCGGCTGGCGTGCGCATCTTCACGGTCGGGCTGAAGTCCGGCGCGTTCGACGCAACCGCGCTCAAGGCGCTCGCGGCCGGTGGTAGCGGAAGCTTTTCGATCGCGGGCTCATCGGCCCAGCTTTCGGCCATATACGACCAGCTCGGCTCCGAGCTGTCGAGCCAGTACGTCATCCGCTACCGCTCCCAAGCGAAGCCGCATACCACGGTGCGAGTGGACGTCTCACTTCCCGACGGAGCCGGCGCCGCCCTCTCGTACGTCACTCCGGCGCTGCCCGTTCACCCCGATCCGCCTTTCCATCGGCCGTTCTGGCAGTCCGCGAGCGCGTTCGCCGCGGTCAGCCTGGTCTGCGCGGTCCTGATCGCGCTGGGGCTCATCACGGCGCTCAGGGCACAGCCCACAAGACGCAGCGTGGGCGCCCGCCTGGCCGAGTTCGTGTCCCCCGCGGAGAAGCCGCACGACGAGCGCCTATCACTGGCGCTGCGCTTCTTCTCCGGCACCGAGCAGAAGCTGGCGCGCAGGGAATGGTGGGGGCGGTTCAAAGAAGAGCTCGACGTCGCCGGCGTGGAGATGCCGGCGGTCCAGGTCGTCGTCCTCACCGGCGTCGGCACGCTGCTCCTGATCGTCGTGATCGTCGCGCTCACCGGGAGCCCCCTCCTCGCGCTGCTCGCGTTCATCGCGCCGCTGGCCGTGCACGTCGTGATCGAGCGCCGGCTCGAACACCAACGCAGCCTCTTCGCCGATCAGCTCGCCGACAACCTGCAGGTGATCGCCTCGGCGCTGCGAGCCGGGCAAAGCTTCGTCGGCGCGCTTTCCGTCGCCGTCTCGGACGCGCCGGAGCCCACGCGACGGGAGTTCAGGCGCGTCGTGGCGGACGAGCGCCTCGGCGTGCCGCTGGACCAGGGTCTGTCCGTCGTGGCTCGCCGCATGCGCAACCGGGACCTCGAGCAGATCGAAGTGGTGGCGGCTCTGCAGCGACAGACCGGGGGCAACATGGCGGAGGTCCTCGATCAGGCCGCAGACACCATGCGCGAGCGGGCCGACCTGCGGCGAATGGTGAAGACACTGACGACGCAAGGGCGCATGTCGCGCTGGGTCGTGTCGGCGCTGCCACCCGGGCTCCTTCTGATCATCTCGGTGATCAACCCGACCTACGTCAAACCGCTCTTCGCCACGGCCGGCGGGCACGCGGTGCTGGTGGTCTGCACGGGCATGATCATCAGCGGCTCGCTCGTCATCAAGCGCATCGTGGATATCGACGTGTGA
PROTEIN sequence
Length: 919
NDESHLRRIINKIVAQVGRRVDESSPMVDARLPDGSRVNAVLPPLSLSGPLVTIRKFGNKRWGLDDLIRLGTLSRETVDFFEQCIRAELNVLISGGTGSGKTTLLNAMSTAIPNEDRIVTIEDAAELRLNQRHVLRLEARTKNIEGEGEIPIRELVRNSLRMRPDRIIVGEVRGAEALDMLQAMNTGHDGSLCTVHANSPRDALARIETMVLMAGYDLPVRAIRQQVASALDLIVHLERLQDGSRRVTAITEVQRMESDVITLQDIFTFKVESVTSNGVVLGKLTPTGLRPTFQEGSRPMRRFRLLPLLVFLLLAPPAAAAGPRLTRTSETEFPGRSYVLSLPRAETISPSAVQVRENGRPVPNLSVLPANTAGTKELAVVLVIDTSGSMRGAPIRGAVAAARVFASHRNPQQQLGIVEFNGAVRTALPLTTNQVAIERALKSAPPLGRNTHVYDAVQTALGMLKAGHIAGGAIVLLSDGADTGSVATTAAVQSAAQAAGVRIFTVGLKSGAFDATALKALAAGGSGSFSIAGSSAQLSAIYDQLGSELSSQYVIRYRSQAKPHTTVRVDVSLPDGAGAALSYVTPALPVHPDPPFHRPFWQSASAFAAVSLVCAVLIALGLITALRAQPTRRSVGARLAEFVSPAEKPHDERLSLALRFFSGTEQKLARREWWGRFKEELDVAGVEMPAVQVVVLTGVGTLLLIVVIVALTGSPLLALLAFIAPLAVHVVIERRLEHQRSLFADQLADNLQVIASALRAGQSFVGALSVAVSDAPEPTRREFRRVVADERLGVPLDQGLSVVARRMRNRDLEQIEVVAALQRQTGGNMAEVLDQAADTMRERADLRRMVKTLTTQGRMSRWVVSALPPGLLLIISVINPTYVKPLFATAGGHAVLVVCTGMIISGSLVIKRIVDIDV*