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13_1_20cm_3_scaffold_827_1

Organism: 13_1_20CM_3_Actinobacteria_68_9

near complete RP 43 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 9 / 38
Location: comp(3..1088)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=429009 specie UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 378.0
  • Bit_score: 231
  • Evalue 2.30e-57
Transcription termination factor Rho n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAC5_AMMDK similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 378.0
  • Bit_score: 231
  • Evalue 1.60e-57
rho: transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 390.0
  • Bit_score: 231
  • Evalue 4.50e-58

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Taxonomy

Ammonifex degensii → Ammonifex → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1086
ATGCTGGATATCCTGCCGCCCGCGATGGCGGAGAAGCTCGAGGAACTGCATCTGGCCGATCTGCACGCGCTCGCCTCCGAGCTTGGGGTGCCCCGATACCGCATGCTTCGCCGGGCCGAGCTCGCCAGAGAGATCGAGGCTCGCCGCGACTCCGGCGAGCCGGAGCCAGAGTTGGAGCCCGAGTCTCAGCCGGAGCCGGAGGACCAGCCGGAGCCGGAACCACGGATCGAGCCTGAGGGGAAGGCCGAACCCGAGCCCGAGGGCGAGCCCGAGGAGTCCCCGGTGGGGCGCGAGCGCGAGCGGCTCGAGGCGGCGGCCACCGAAGACGTGACCGGGGTGCTCGACATCACCCCGCAGCGATACGGGTTCCTACGACTGAACCGGCTCGAGACGAACCCCGATGACGTCTATGTCTCGGCGTCACAGGTGCGACGCTGTGAGCTGCGCTCCGGGGACGAGGTCTCAGGACCGGCGCGTGCGCCGCGCCGAGGCGAGCGCCACCGCGCGCTGGTCCACGTCGATCGGGTCAGCGGTGGCGAGCCGCTCCTCGATCGCCCCGAGTTCGAGAAGCTGACCCCGATTCTGCCGAAGCGTCGTCTGGCGCTCGACCTCCGGCCCTCCGACATCCTCACTCGGGCGGCGGATCTGCTTGCCCCGCTGGCATACGGACAGCGCGTGCTGGTCATGTCGGCCCCGCGCTCCGGCCGCACGACCCTCCTGCGTGGCCTGGCGGCGGCGGTCGGGGCGGTCGAGGGCCCCGAGCTGATCGTGCTGCTGATCGACGAGCGCCCCGAGGAGGCGACGGCCTGGCGCGAGGCGCTGTCGGACGCCCAGGTCGCGACCGCCACGGCCGAGCTCGCGCCCGCCGAGCAGGTGCGGGTTGCCCGGTTGGCGCTCGAGTGGGCGCGGCGCCGGGCGGAGGCGGGCGCTGACGTGGTTTTGATCGTCGATTCGCTGTCGCGGCTCGCCGTCGCGGCGGGCGAGGCCGCCGAGGTCAAGCGCCTGTTCGGCTCCGGGCGCGACCTCGCCGAGGAGGGAGCGGGCTCGTTGACCGTCATCGCCACGGTGGTCGAGGGCGCCGAGGAC
PROTEIN sequence
Length: 362
MLDILPPAMAEKLEELHLADLHALASELGVPRYRMLRRAELAREIEARRDSGEPEPELEPESQPEPEDQPEPEPRIEPEGKAEPEPEGEPEESPVGRERERLEAAATEDVTGVLDITPQRYGFLRLNRLETNPDDVYVSASQVRRCELRSGDEVSGPARAPRRGERHRALVHVDRVSGGEPLLDRPEFEKLTPILPKRRLALDLRPSDILTRAADLLAPLAYGQRVLVMSAPRSGRTTLLRGLAAAVGAVEGPELIVLLIDERPEEATAWREALSDAQVATATAELAPAEQVRVARLALEWARRRAEAGADVVLIVDSLSRLAVAAGEAAEVKRLFGSGRDLAEEGAGSLTVIATVVEGAED