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13_1_20cm_3_scaffold_8861

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_8861_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1..1221
DNA (1221bp) protein (407aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0B7_9BURK
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
13_1_20cm_3_scaffold_8861_2
unknown

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comp(1218..1466)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_20cm_3_scaffold_8861_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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1561..1941
DNA (381bp) protein (127aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLX1_AZOSU
hypothetical protein; K07659 two-component system, OmpR family, phosphate regulon response regulator OmpR Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
13_1_20cm_3_scaffold_8861_4
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1938..2225
DNA (288bp) protein (96aa)
Response regulator n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K671_AZOSB
ompR; osmolarity response regulator; K07659 two-component system, OmpR family, phosphate regulon response regulator OmpR Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
ompR; osmolarity response regulator
13_1_20cm_3_scaffold_8861_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2222..2521
DNA (300bp) protein (100aa)
envZ1; osmolarity sensor protein (EC:2.7.13.1); K07638 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Osmolarity sensor protein (Fragment) n=1 Tax=sediment metagenome RepID=D9PNK6_9ZZZZ
signal transduction histidine kinase
13_1_20cm_3_scaffold_8861_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2535..3389
DNA (855bp) protein (285aa)
envZ1; osmolarity sensor protein (EC:2.7.13.1); K07638 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00036DDC2A
osmolarity sensor protein
13_1_20cm_3_scaffold_8861_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3648..4145)
DNA (498bp) protein (166aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ligT; 2'-5' RNA ligase (EC:6.5.1.-)
2'-5' RNA ligase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NYK1_AROAE
13_1_20cm_3_scaffold_8861_8
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4145..4693)
DNA (549bp) protein (183aa)
Transcriptional regulator n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A3J0_DEIPD
transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
transcriptional regulator
13_1_20cm_3_scaffold_8861_9
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4693..5160)
DNA (468bp) protein (156aa)
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUS1_SIDLE
13_1_20cm_3_scaffold_8861_10
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5157..5729)
DNA (573bp) protein (191aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SCW1_GALCS
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
13_1_20cm_3_scaffold_8861_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5904..8708
DNA (2805bp) protein (935aa)
transcription-repair coupling factor Mfd; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Transcription-repair-coupling factor n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLV5_AZOSU
transcription-repair coupling factor Mfd
Displaying 11 items

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