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13_1_20cm_3_scaffold_2196_11

Organism: 13_1_20CM_3_Betaproteobacteria_63_8

partial RP 36 / 55 MC: 2 BSCG 34 / 51 MC: 3 ASCG 7 / 38 MC: 2
Location: comp(11957..13333)

Top 3 Functional Annotations

Value Algorithm Source
O-antigen polymerase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5U7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 29.1
  • Coverage: 454.0
  • Bit_score: 129
  • Evalue 1.10e-26
O-antigen polymerase family protein {ECO:0000313|EMBL:BAH37607.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiac UNIPROT
DB: UniProtKB
  • Identity: 29.1
  • Coverage: 454.0
  • Bit_score: 129
  • Evalue 8.90e-27
O-antigen polymerase family protein similarity KEGG
DB: KEGG
  • Identity: 29.1
  • Coverage: 454.0
  • Bit_score: 129
  • Evalue 1.80e-27

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1377
GTGCGCGATCCTCTGCGTGTCACCCTATTCGTGCTTACAGTCTTGACGATCAGCCGAGTGCACCAACACTATCCCGTCCTCGCGAAGTTTCGACCTGCTCTCCTGCTGGTCGTCGCGTCAACTGGTTATGCATACCTGAATCCTCGCTTTCTCACGTATCAGAACGTGTTGCGCCTTTGGCCGATGCGGCTCGTCGCAATGCTGGCGATTCTTGCCTGCGTTTCAGCTCCGTTTGGCATTTCACTCGGCGGCTCAGCGGCTTTCATTCTAGACTCATACGCGAAGACTCTCGCCTACGCATTCCTGATCGCGGTGGGCATCCGGCACGTACGTGATCTCTACACGTTTGTGTGGGCGTACGTGATCAGTTGCGGTATTCTTGCTTTTTTCTCGTTGTTCGTCTTCGGGATTTCGAGGGGAAGCGGTAGTTACGTCACCCGCCTGAACAACCTTTACACCTACGACTCGAACGACCTCGGCGTCGTCATGATGGTTGGCTTCCCTCTGACGCTGCTGCTCCTCACCGTCGCTCGCGGTTCTAGACGCTGGGCTTTGCTGATCATTCTCCTCGGCATTTCGGCAACGATGGCGCGTTCAGGCTCGCGCGGTGGGTTCCTCGGCTTCGTTGCGGTAGGCGGGGCTGCGCTCATACTCGCGAACGGAGTGTCGCCTGCCCGTCGCTTGCTGGTTTTCGTAGTTGCGCTCTTCGCGCTCGCAATTGGAGCGCCGCCGGGATACTGGAAGCAGATGAATACAATCCTTGCGCCTGAATCCGATTACAACTACACGAGTATCGATGGACGGAAGGCCGTAATAACGCGCGGTCTTGGCTACGTGAGTCAGTACCCGGTGTTCGGCCTGGGCATCAACAACTTTGCGAGAGCCGAATGTACCATCTCGCCGAAGCTTGCTCTGCTGCGTCGTAACGGTCCGATGCGCTGCACACCTCCGCACAATTCCCACTTGCAGGCAGCTGCGGAACTCGGAGTTTCCGGCTTCGTGGTCTGGGCTTCGCTCATAATCGGAGGAGTCGTCGGTCCTCTCCGGCTTCGCAGGCGCCTGCCGAGACAATGGCAGCATGGCACTGACTCCGAGCGATTCCTCTACGCGGCGGGGGGATTTTTCTCAGTCGCGATGATCGGCTTTGCCGTAACATCATTCTTCGTCACATTCGCGTGGATGGATCCGGTTTATCTGCTGGCTGCCTTGCTGACCGGGCTGTACATAGCCGTGGGAGTTCAGCTTGAGCACAGAGGCAACCAACGCTACGGCCCTGCGACCGACTCGGGAGTTCCCACAGGGCGTGCCGGGTGGCGCGTCGCGCAGAGTAGATGGCGCGCCCACAGTCTGGGCCCGCCCGGGACGGCAAGGAATTAG
PROTEIN sequence
Length: 459
VRDPLRVTLFVLTVLTISRVHQHYPVLAKFRPALLLVVASTGYAYLNPRFLTYQNVLRLWPMRLVAMLAILACVSAPFGISLGGSAAFILDSYAKTLAYAFLIAVGIRHVRDLYTFVWAYVISCGILAFFSLFVFGISRGSGSYVTRLNNLYTYDSNDLGVVMMVGFPLTLLLLTVARGSRRWALLIILLGISATMARSGSRGGFLGFVAVGGAALILANGVSPARRLLVFVVALFALAIGAPPGYWKQMNTILAPESDYNYTSIDGRKAVITRGLGYVSQYPVFGLGINNFARAECTISPKLALLRRNGPMRCTPPHNSHLQAAAELGVSGFVVWASLIIGGVVGPLRLRRRLPRQWQHGTDSERFLYAAGGFFSVAMIGFAVTSFFVTFAWMDPVYLLAALLTGLYIAVGVQLEHRGNQRYGPATDSGVPTGRAGWRVAQSRWRAHSLGPPGTARN*