ggKbase home page

13_1_20cm_3_scaffold_202

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_202_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..449)
DNA (447bp) protein (149aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GN45_9BACT
40-residue YVTN family beta-propeller repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphoesterase
13_1_20cm_3_scaffold_202_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(742..1506)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003795B31
Phosphoesterase {ECO:0000313|EMBL:AHG93065.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
phosphoesterase
13_1_20cm_3_scaffold_202_3
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

1557..2072
DNA (516bp) protein (172aa)
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:AHY46334.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source=
Acetyltransferase (GNAT) family
N-acetyltransferase ats1 id=2466389 bin=GWC2_Ignavibacteria_56_12 species=Legionella pneumophila genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_1_20cm_3_scaffold_202_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2065..3030)
DNA (966bp) protein (322aa)
Tetratricopeptide repeat-containing protein {ECO:0000313|EMBL:AHG92038.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Tetratricopeptide repeat-containing protein
TPR repeat protein id=2463889 bin=GWF1_Xanthomonadales_69_6 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
13_1_20cm_3_scaffold_202_5
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3083..3811)
DNA (729bp) protein (243aa)
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cy
Endonuclease III n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MFT7_CORCM
nth1a; base excision DNA repair protein
13_1_20cm_3_scaffold_202_6
unknown

Not on your lists

comp(3993..4367)
DNA (375bp) protein (125aa)

This feature has no annotations

13_1_20cm_3_scaffold_202_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4488..4688
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QLS9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:AHG88583.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_202_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4694..6055)
DNA (1362bp) protein (454aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Glutamine synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T4_GEMAT
glutamine synthetase, type I
13_1_20cm_3_scaffold_202_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6209..8434
DNA (2226bp) protein (742aa)
Glutamine synthetase type III n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4X6_GEMAT
Glutamine synthetase type III domain-containing protein {ECO:0000313|EMBL:AHG87975.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Glutamine synthetase type III domain-containing protein
13_1_20cm_3_scaffold_202_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8771..9343
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T3_GEMAT
Double zinc ribbon {ECO:0000313|EMBL:AHG87983.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Double zinc ribbon
13_1_20cm_3_scaffold_202_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9340..10182
DNA (843bp) protein (281aa)
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; TaxID=86129
ABC transporter substrate-binding protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A406A rbh
protein of unknown function DUF178
13_1_20cm_3_scaffold_202_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10172..12271
DNA (2100bp) protein (700aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" s
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T2_GEMAT rbh
two-component histidine kinase
13_1_20cm_3_scaffold_202_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12268..13308
DNA (1041bp) protein (347aa)
Two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T1_GEMAT
Two-component response regulator {ECO:0000313|EMBL:BAH37241.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (
two-component response regulator
13_1_20cm_3_scaffold_202_14
Nocardia cyriacigeorgica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13475..14326
DNA (852bp) protein (284aa)
Expressed protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LM41_ARALL
Uncharacterized protein {ECO:0000313|EMBL:CCF62272.1}; TaxID=1127134 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia cyriacigeorgica (strain GUH-2).;"
hypothetical protein
13_1_20cm_3_scaffold_202_15
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

14409..15449
DNA (1041bp) protein (347aa)
Alpha/beta hydrolase fold n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYQ9_RUBXD
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABG03469.1}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobac
alpha/beta hydrolase fold protein domain-containing protein
13_1_20cm_3_scaffold_202_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15656..15901
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S8_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37238.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_202_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15906..16403)
DNA (498bp) protein (166aa)
ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67R22_SYMTH
DEAD/H associated domain protein {ECO:0000313|EMBL:AHG88940.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DEAD/H associated domain protein
Displaying 17 items

View Taxonomy