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13_1_20cm_3_scaffold_179_11

Organism: 13_1_20cm_3_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(10748..11428)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG88832.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 191.0
  • Bit_score: 217
  • Evalue 1.60e-53
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 191.0
  • Bit_score: 217
  • Evalue 3.20e-54
sigma-24 FecI-like protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12554677 bin=CNBR_ACIDO species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 34.4
  • Coverage: 183.0
  • Bit_score: 106
  • Evalue 4.90e-20

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 681
ATGCCCACGCAACCGTATATTAGCCTCGCGATGAGCCGGAATCGTTCTCGTAGAAAAAAAAGAGACACGGCCGCCGAGGGCGGGAGCGTCGTCTATCACGACCGCGCATCATATGCGCTCGACACGCAGCTCGCGTCGCTGGCCTCGGCCGGTGACGCCGCCGCGTTTACGACACTGGTGACTCGCTTTCAGCCGGCTGTTTTCCGCTGGGCTCTGATGTTCGCGCGCGATCCGGACGACGCAGAGGACATCACCCAGGAAGTATTCGTGCGCATCCATCGCCAGATCGCCAACTACAGATCCGACGGCCCGCTCGAGGCCTGGCTCTACCGGATCACCAGGCGCGCCGCGACCCAAATGCGTCGTACGCGCAAGCGTCGCGGCCGTCTGGCCCTCACACCGGCGGCGCGTCCGCTGCGAGATGTCTACACAACTGATCCCGGCGGTCGAGTCGATCGCGAACGCGCGGCAACTGTGATCCGTGAGTTGTTCTCCGCGCTGCCGCAACGCCAGCGCGAGATTTTCGACCTTGTCGACTTGCAGGGCGTTTCTCCAGCCGAAGTAGCTGAACGAACGGGGATGAAGCCGGTCTCGGTGCGCGCGAATCTTTTCAAGGCGCGCAAAGCAATTCGAGACAGCCTCCTGGCGACACATCCGGCTTATCGAGAGCTGTCCCGATGA
PROTEIN sequence
Length: 227
MPTQPYISLAMSRNRSRRKKRDTAAEGGSVVYHDRASYALDTQLASLASAGDAAAFTTLVTRFQPAVFRWALMFARDPDDAEDITQEVFVRIHRQIANYRSDGPLEAWLYRITRRAATQMRRTRKRRGRLALTPAARPLRDVYTTDPGGRVDRERAATVIRELFSALPQRQREIFDLVDLQGVSPAEVAERTGMKPVSVRANLFKARKAIRDSLLATHPAYRELSR*