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13_1_20cm_3_UNK

Displaying items 1-50 of 305424 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_20cm_3_scaffold_434
Species: Exophiala dermatitidis (55.56%)
18 16740 bp 26.01 113.29 65.21
13_1_20cm_3_scaffold_11144 23 11116 bp 26.25 112.99 55.76
13_1_20cm_3_scaffold_99881
Species: Rhizophagus irregularis (66.67%)
3 3209 bp 27.05 93.55 51.70
13_1_20cm_3_scaffold_224084
Species: GWF2_Bacteroidetes_38_335_curated (100%)
1 1212 bp 68.07 83.25 100.00
13_1_20cm_3_scaffold_469641 1 1261 bp 26.09 76.43 11.90
13_1_20cm_3_scaffold_294617 0 1019 bp 55.94 74.63 0.00
13_1_20cm_3_scaffold_302111 1 1002 bp 23.25 74.15 38.32
13_1_20cm_3_scaffold_45880
Species: Branchiostoma floridae (50%)
2 2982 bp 52.98 72.89 27.36
13_1_20cm_3_scaffold_194855 2 1295 bp 55.68 72.88 5.79
13_1_20cm_3_scaffold_289351
Species: Mucor ambiguus (50%)
2 1032 bp 57.75 69.32 13.08
13_1_20cm_3_scaffold_297937
Species: marine gamma proteobacterium HTCC2148 (50%)
2 1011 bp 63.50 69.27 66.47
13_1_20cm_3_scaffold_211386
Species: Pyrinomonas methylaliphatogenes (100%)
1 1247 bp 60.71 67.23 99.84
13_1_20cm_3_scaffold_163399
Species: Bradyrhizobium sp. S23321 (50%)
2 1404 bp 55.27 64.36 19.23
13_1_20cm_3_scaffold_288036
Species: Rhizophagus irregularis (100%)
3 2431 bp 28.63 63.29 25.92
13_1_20cm_3_scaffold_104452 3 2609 bp 39.13 63.11 27.02
13_1_20cm_3_scaffold_120260 3 2415 bp 35.03 62.88 59.38
13_1_20cm_3_scaffold_258293 1 1116 bp 41.58 62.30 29.30
13_1_20cm_3_scaffold_2238
Species: Rhizophagus irregularis (75%)
4 7106 bp 37.48 60.75 94.53
13_1_20cm_3_scaffold_152796
Species: Azospirillum lipoferum (50%)
2 2561 bp 66.15 59.79 83.76
13_1_20cm_3_scaffold_100306
Species: Streptomyces natalensis (50%)
2 1738 bp 69.16 59.36 93.73
13_1_20cm_3_scaffold_129670
Species: RIFOXYD12_FULL_Chloroflexi_57_15_curated (100%)
1 1554 bp 67.95 58.95 84.36
13_1_20cm_3_scaffold_229267
Species: alpha proteobacterium BAL199 (100%)
2 1197 bp 62.82 57.25 98.25
13_1_20cm_3_scaffold_87963
Species: Rhizophagus irregularis (100%)
1 1837 bp 28.85 56.84 57.98
13_1_20cm_3_scaffold_287725
Species: Anopheles aquasalis (100%)
1 1542 bp 54.02 55.99 29.77
13_1_20cm_3_scaffold_297496
Species: Myotis davidii (100%)
1 1012 bp 55.73 55.56 70.26
13_1_20cm_3_scaffold_154719
Species: Thermotoga sp. TBYP3.1.4.1 (100%)
1 1439 bp 58.10 55.12 25.23
13_1_20cm_3_scaffold_141744 1 1496 bp 52.61 55.03 35.90
13_1_20cm_3_scaffold_108422
Species: Arthrobacter sp. SPG23 (50%)
2 1680 bp 66.79 54.83 39.29
13_1_20cm_3_scaffold_254216
Species: Verrucosispora maris (50%)
2 1127 bp 65.84 54.12 84.65
13_1_20cm_3_scaffold_231774
Species: Rhodopseudomonas palustris (100%)
1 1190 bp 60.92 53.79 92.77
13_1_20cm_3_scaffold_281417 0 1052 bp 24.14 53.68 0.00
13_1_20cm_3_scaffold_194822
Species: Rhizobium tropici (50%)
2 1295 bp 67.95 52.72 97.99
13_1_20cm_3_scaffold_72169
Species: Gordonia rhizosphera (100%)
1 1997 bp 66.45 52.66 87.28
13_1_20cm_3_scaffold_158919
Species: Kutzneria albida (50%)
2 1422 bp 66.81 51.89 71.94
13_1_20cm_3_scaffold_94478
Species: Bradyrhizobium japonicum (50%)
2 1782 bp 63.02 51.69 97.98
13_1_20cm_3_scaffold_212324 2 1832 bp 33.79 51.65 23.74
13_1_20cm_3_scaffold_277919 1 1062 bp 45.20 51.52 44.92
13_1_20cm_3_scaffold_234811
Species: Sutterella parvirubra (50%)
2 1182 bp 55.58 50.96 11.68
13_1_20cm_3_scaffold_236536
Species: Capitella teleta (100%)
1 1178 bp 22.41 49.43 21.65
13_1_20cm_3_scaffold_351246 3 1546 bp 64.36 48.87 93.92
13_1_20cm_3_scaffold_224378
Species: Ixodes ricinus (50%)
2 1211 bp 30.31 48.29 38.15
13_1_20cm_3_scaffold_212731 1 1243 bp 59.21 47.45 93.16
13_1_20cm_3_scaffold_160835 1 1415 bp 57.81 46.83 0.00
13_1_20cm_3_scaffold_198604
Species: Desulfotomaculum acetoxidans (100%)
1 1284 bp 58.64 46.52 89.49
13_1_20cm_3_scaffold_246102
Species: Afipia broomeae (100%)
1 1150 bp 63.13 46.05 99.65
13_1_20cm_3_scaffold_8613
Species: Rhizophagus irregularis (75%)
8 4488 bp 26.85 45.30 53.28
13_1_20cm_3_scaffold_251307
Species: RLO_RIF_CHLX_71_12 (100%)
1 1136 bp 68.13 45.29 96.92
13_1_20cm_3_scaffold_93398
Species: Burkholderia sp. AU4i (50%)
2 1791 bp 57.40 44.85 85.09
13_1_20cm_3_scaffold_146598
Species: Bradyrhizobium sp. ORS 375 (100%)
1 1474 bp 62.55 44.61 65.74
13_1_20cm_3_scaffold_142318
Species: RBG_16_Chloroflexi_48_8_curated (100%)
1 1494 bp 59.97 44.52 100.00
Displaying items 1-50 of 305424 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.