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13_1_20cm_4_scaffold_145417_1

Organism: 13_1_20CM_4_Rokubacteria_70_13

partial RP 21 / 55 MC: 3 BSCG 25 / 51 MC: 3 ASCG 4 / 38 MC: 2
Location: comp(3..1379)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=GWA2_Rokubacteria_73_35_curated UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 458.0
  • Bit_score: 736
  • Evalue 2.70e-209
RNA polymerase sigma-54 factor id=3879943 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 458.0
  • Bit_score: 736
  • Evalue 1.90e-209
RNA polymerase sigma 54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 462.0
  • Bit_score: 407
  • Evalue 4.50e-111

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Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1377
CTCCGGCAGAGCCAGCGGGTCGTCATGACCCCGCTGCTCCAGCAGGCCATCCAGCTCCTGCAGCTCTCCACGCTCGAGCTCCAGGAGGTCGTGCAGAAGGAGCTCCTCGAGAACCCGCTGTTGGAAGAGATGCCGGTGGACGGCGCCGAGACGCCGGACGCGGGCGAGGCCACGCCGAGCGCCGAGGCGACGCCGGCGCCGACGGTGGAGCCGATCACCGTCGATCCGCCGCCGACGGCCGAACGACAGACGGACGACCTGCCGTTCGACCCGATCTCCGTGATGTTCGACGAGCCGGAGGAGCGCTCCCTCGTCGCGCAGGAGGAGCGGGAGGACCTCCCGTTCGAGAACATGGTCCGCTCGGTCTCGTCGCTCGCCGACCACCTCGAGGAGCAACTCCGCTTCGTCACCGAGGACCCGGCGGCCCGGCGGATTGGCGCCGAGATCATCGGCAACCTCGACGAGGACGGGTACCTTCGCGCGGAGCTCGAGGAGATCGCCCAGCGGTGCGCCGCGACGCCCGAGGAGGTCGAGCGCGTCCTGACCGAGATGATCCAGAAATTCGACCCGATCGGCGTTGGCGCGCGCACGATCTCGGAGTGCCTCCTGCTCCAGCTGCGGTCGAACCCGCCCGTCGACCCGGTGTCGGTCGAGATCGTCGAGCGGCACTTCGAGGACCTGAGCCGCCGCCGCTACGCGGACATCGCGCGGGCGTTGAAGCTGTCGGCCGACCGGATCATGGAGTCGGTCGAAGAGATCATGGCGCTCGAGCCCAAGCCCGGCCGCCGCTTCGGCGGCAACGACTCGCGCTACATCGTGCCGGACGTCTTCGTCTACAAGCTCGGGAGCGACTACACGGTCGTACTGAACGAGGAGGGGATTCCGCGCCTGCGCGTGAACTCCCTCTACCGCTCGCTGCTCCGGAGCTCCGGCGACGAGGCCCGCCAGTACGTCGAGCAGAAGTTGCGCTCGGCCCTCTGGCTCATCAAGTCGGTCGACCAACGGCAGCGTACCCTGCGCAAGGTCACCCAGTCCATCGTGAAGTTCCAGCGCGAGTTCCTCGACAAGGGCCTGCCCTACCTCCGGCCCCTGTCGCTCCGGGACGTCGGCGAAGACATCAGCATGCACGAGTCCACGATCAGCCGCGTGACGACCAACAAGTATGTCGAGACCCCCCAGGGGCTGTTCGAGCTCAAGTTCTTCTTCCACAGCGGCATCGCCTCCGGGGATGGCGAGATGGTCTCCTCCGTCTCGGTGAAGAAGATGATCCAGGATCTCCTGGGGAACGAGGACGCCACCAAGCCCCTGTCCGACCAGGAGGTCGCCGGGATCCTCAAGGGCCGCGGCCTCACGATCGCCCGGCGCACCGTGGCGAAG
PROTEIN sequence
Length: 459
LRQSQRVVMTPLLQQAIQLLQLSTLELQEVVQKELLENPLLEEMPVDGAETPDAGEATPSAEATPAPTVEPITVDPPPTAERQTDDLPFDPISVMFDEPEERSLVAQEEREDLPFENMVRSVSSLADHLEEQLRFVTEDPAARRIGAEIIGNLDEDGYLRAELEEIAQRCAATPEEVERVLTEMIQKFDPIGVGARTISECLLLQLRSNPPVDPVSVEIVERHFEDLSRRRYADIARALKLSADRIMESVEEIMALEPKPGRRFGGNDSRYIVPDVFVYKLGSDYTVVLNEEGIPRLRVNSLYRSLLRSSGDEARQYVEQKLRSALWLIKSVDQRQRTLRKVTQSIVKFQREFLDKGLPYLRPLSLRDVGEDISMHESTISRVTTNKYVETPQGLFELKFFFHSGIASGDGEMVSSVSVKKMIQDLLGNEDATKPLSDQEVAGILKGRGLTIARRTVAK