ggKbase home page

13_1_20cm_4_scaffold_13562_4

Organism: 13_1_20CM_4_Cyanobacteria_61_6

partial RP 5 / 55 MC: 1 BSCG 5 / 51 MC: 1 ASCG 2 / 38 MC: 1
Location: comp(3768..4055)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HXC0_CYAP4 similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 84.0
  • Bit_score: 103
  • Evalue 1.30e-19
Integrase catalytic region {ECO:0000313|EMBL:ACL44811.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / A UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 84.0
  • Bit_score: 103
  • Evalue 1.90e-19
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 84.0
  • Bit_score: 103
  • Evalue 3.70e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cyanothece sp. PCC 7425 → Cyanothece → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGCTCAGCCCAGAGGCATTTGAGCAATGGTGTTGGCGATTGGGCCTTTCCGATGAGGCGAAAGCGGTCATTACCCACATTCGCACCTCTCCTCCAGCACGCCATGTCCAGCGTTCTGCCGGGAATATGAGCGGGACATATCCTTCCCTCACGATGGGTTGCGGAATTCAGTTTGAGAGCCATCGCAACGAACTCCCTTTTGCCTACCTGATAGACCACGATCCCAATGTCCTGGAGTTTTACGATCAACCCGCAGGTGAGATCAAGTCGAAGGTGAGGAAGAAGTGA
PROTEIN sequence
Length: 96
MLSPEAFEQWCWRLGLSDEAKAVITHIRTSPPARHVQRSAGNMSGTYPSLTMGCGIQFESHRNELPFAYLIDHDPNVLEFYDQPAGEIKSKVRKK*