ggKbase home page

13_1_20cm_4_scaffold_288_5

Organism: 13_1_20CM_4_Gemmatimonadetes_69_16

partial RP 27 / 55 BSCG 26 / 51 ASCG 10 / 38
Location: comp(5771..6169)

Top 3 Functional Annotations

Value Algorithm Source
Putative pilin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 123.0
  • Bit_score: 98
  • Evalue 4.60e-18
putative pilin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 113.0
  • Bit_score: 118
  • Evalue 1.00e-23
putative pilin similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 122.0
  • Bit_score: 105
  • Evalue 1.00e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 399
ATGAAGGCCAAAGGCTTCACCCTCATCGAACTGCTCATCGTGATGGCGCTGATCGGCCTGCTGGCCACCATCGCGATCCCCAGGCTCGCCAACACCAAAGAGCGAGCACAGCTCGCCGCCATGAAGTCCGACCTCCGTAATCTTGTGACGGTGCAAGAGAACTACCTTGCCGAAAACCAAACGTATACGACGGACCTGGGCGGGTCATATCACGTGTCTCCTGGCAACCGGCCGCCCGCGATTACGCTGACCAAGGATGGGTGGACTGCGACGATCACGGGCGCCAACACGCTCCAGCAGTGCGCCATCTTCGTGGGCTCGACACCGGCCCCGCCGGCCACGCGCGAAGGGGCGCCGGCCTGCGAGAGGGCCGCCACGACGGCGACCCCGCTGCCGTAG
PROTEIN sequence
Length: 133
MKAKGFTLIELLIVMALIGLLATIAIPRLANTKERAQLAAMKSDLRNLVTVQENYLAENQTYTTDLGGSYHVSPGNRPPAITLTKDGWTATITGANTLQQCAIFVGSTPAPPATREGAPACERAATTATPLP*