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13_1_20cm_4_scaffold_288_20

Organism: 13_1_20CM_4_Gemmatimonadetes_69_16

partial RP 27 / 55 BSCG 26 / 51 ASCG 10 / 38
Location: comp(25801..26604)

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter; K09690 lipopolysaccharide transport system permease protein Tax=RBG_19FT_COMBO_Actinobacteria_36_27_curated UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 264.0
  • Bit_score: 243
  • Evalue 2.50e-61
ABC transporter; K09690 lipopolysaccharide transport system permease protein id=12557474 bin=CNBR_ACIDO species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 265.0
  • Bit_score: 309
  • Evalue 4.50e-81
ABC-2 type transporter similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 257.0
  • Bit_score: 195
  • Evalue 2.00e-47

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_36_27_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGTTCGCCCGGCTCCGCGACGATCTGCGTTCGATGCTCCGCGAGCAGGTAGAATACCGGGAACTCCTCCTCTCCGTCACTCGGCGCGACCTGCTGTTGCGCTACCGGCAAACCGTGATGGGCTTCGGCTGGGCGGTCTTCACCCCGCTCCTCAACCTGGTCGTCTTCTCCGTCGTGTTCACTCACGTCGTCCCGATCCAGACCACGCTCCCGTACCCGATCTACGCCTATGCGGGCCTGCTGCCGTGGAACTTCTTCGCCTCCGCGCTGCGCTTCTCGATGACGTCCCTCACCAACAACCAGACCCTGGTGACCAGAGTCTACTTCCCGCGCGAGATCTTCCCGTTCTCGGCGGTGCTCGTGGGCTTGGTGGACTTCGTGGTGGCCGGTACGGTGCTGGCGGGGCTGATGATCTACTACCGAGTCGGGGTGTCAGCGAGCCTCCTGTTCCTGCCGGTCGTGATCGCGGTACAGCTGATGTTCACCGCGGGGCTTGCCCTGCTGGTTGCGATGGCGAACCTCTACCTGCGCGACGTGCGCTACGCGTTCGACGCGATCCTCGTTGTCTGGATGTTCGCGACCTCGGTCGTGTATCCGGTCGACCGCGTCGGCGGTCGGCTCGGCGCGCTTCTCGCGCTCAATCCGATGACGCTGATCATCGACGCCTACCGCGCTGTGCTGCTGGGCGGCGAACTGCCGGCGCCGGGGCCGTTCACGGCGGCGGCCCTCGTCTCGGTCGCGACGCTGGGGATCGCGTGGCTCGTTTTCCATCGCGCCGAGATTCGCTTCGCGGAGAACGTGTGA
PROTEIN sequence
Length: 268
MFARLRDDLRSMLREQVEYRELLLSVTRRDLLLRYRQTVMGFGWAVFTPLLNLVVFSVVFTHVVPIQTTLPYPIYAYAGLLPWNFFASALRFSMTSLTNNQTLVTRVYFPREIFPFSAVLVGLVDFVVAGTVLAGLMIYYRVGVSASLLFLPVVIAVQLMFTAGLALLVAMANLYLRDVRYAFDAILVVWMFATSVVYPVDRVGGRLGALLALNPMTLIIDAYRAVLLGGELPAPGPFTAAALVSVATLGIAWLVFHRAEIRFAENV*