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13_1_20cm_4_scaffold_7616_20

Organism: 13_1_20CM_4_Actinobacteria_69_9

partial RP 30 / 55 MC: 2 BSCG 35 / 51 ASCG 12 / 38 MC: 1
Location: comp(13486..15279)

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RBG_16_Actinobacteria_68_12_curated UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 597.0
  • Bit_score: 930
  • Evalue 1.30e-267
Transcription-repair-coupling factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEF5_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 604.0
  • Bit_score: 714
  • Evalue 7.90e-203
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 604.0
  • Bit_score: 714
  • Evalue 2.20e-203

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1794
GTCCCCGCGCTCTCGAAGCTCGGGGGCAAGGCGTGGGAGAACCTCAAGAACCGCGCCCGTGCGTCGGTGCGCGAGCTCGCCGGCGAGCTGCTCGCGCTGTACGCGCAGCGTCAGCAGGCGCCGGGCGTCGCGTACGACCTCCGCCACGAGTGGCTCGAGCGGCTGGAGACGGAGTTCCCGTATCGCGAGACGCCCGACCAGCAGGCCGCGATCGAAGCGGTGAAGGAGGATCTCGAGGCGCCGCGGCCGATGGACAGGCTGGTCTGCGGCGATGTCGGGTTCGGCAAGACGGAGGTAGCGATCCGCGCCGCGTTCGCCGTCGCGGTCAACGGCAAGCAGACGCTGATGCTCGCGCCGACGACGATCCTGGCGGAGCAGCACTGGCACACGTTCCGCGCGCGCTACCGGGACTTCCCGGTGAGAGTGGAGATGGTGTCGCGCTTCCGGCCGCCGCGTGAGGTGAAGCAGGTCCTCGCCGACTTCCAGGCCGGTAAGGTCGACGTGCTGATCGGAACGCATCGCATCCTCAGCCGCGACGTGGTCCCGAAGGAGCTCGGCCTGGTGATCCTCGACGAGGAGCAGCGCTTCGGCGTCGCGCAGAAGGAGCTTCTGCGCGCCCTCCGGCTCGAGGTGGACGTGCTCACGCTCTCGGCGACGCCGATCCCGCGCACGCTGCACATGTCCCTGTCGGGCCTGCGCGACATCTCGATCATCGAGACCCCGCCCGAGGGCCGGCGCCCGATCCGCACGACGGTCGGTGAGTACGACGAGGAGCTGGTGAAGTTGGCGCTCGAGCGCGAGGTGGAGCGCGAAGGGCAGGCGTTCTACCTGCACAACCGCGTCGACACGATCGACGACGCGGCCGAGAAGCTGCAACAGCTGGCGCCGAACCTGCGCTTCCTCGTCGCGCACGGGCAGATGCGCGAGCGGGAGCTCGAGGAGAAGATGCACGGCTTCCTGCGGGGAGACGCGGACGTGCTCGTCTCGACGACGATCATCGAGTCGGGGCTCGACATCCCACAGGCCAACACGTTGATCGTCGAGCGCGCCGACCAGCTCGGGCTCTCCCAGCTGTACCAGATCCGCGGGCGCGTCGGCCGATCCGACGTGACCGCGCACGCGTACCTCTTCTATCCGGACATGTCCGAGTTGACGCCTGAAGCCCGAGCGCGCCTCGCGACGCTCGCCGACCACACGGAGCTCGGCGCGGGCTTCGCGATCGCGATGCGCGACCTCGAGATCCGCGGCGCCGGCAACCTGCTCGGCGACGAGCAGTCCGGCCACGTCGCTGCCCTCGGCTTCGAGCTCTATGTCGAGCTGCTCGCCGAGGCCGTCGCGGAGCTCTCGGGCGAGCGGCGCATCGCCGCCCGGCCCGTGCGCGTCGACGCGCGCGTCGACGCTTACGTCCCCGCGGAGTACATCGAGTCCGAAGCGCTCAAGATCGACCTCCACCGGCGCCTCGCGCTGACGGAGGACGAGGACGAGCTGCGCGAGCTGCAGGCTGCGACGGAGGATCGTTTCGGCCCGCTGCCCGAGCCGGTCGAGAACCTCTTCCTGATCCAGGAGGCGAAGCTGAAGCTTGCACGCGCCGGCGCCGACTATCTCGTGTTCCGAGGCGGAAAGGCGAGCGTCGGGCAGATGGTGCTCGGGTCCTCGGAGCTGCGCGACCTGCGCCGCCGGGTCGACACGGCCGTGTATTCGACCGGCAATCGTGAAATTACGTTAAGAGAGGACGGTTTTCCGCAGGCGCTCAGACTCGTCGATGCTATACTGGCCGCGCGCCAAGCAGCGTGA
PROTEIN sequence
Length: 598
VPALSKLGGKAWENLKNRARASVRELAGELLALYAQRQQAPGVAYDLRHEWLERLETEFPYRETPDQQAAIEAVKEDLEAPRPMDRLVCGDVGFGKTEVAIRAAFAVAVNGKQTLMLAPTTILAEQHWHTFRARYRDFPVRVEMVSRFRPPREVKQVLADFQAGKVDVLIGTHRILSRDVVPKELGLVILDEEQRFGVAQKELLRALRLEVDVLTLSATPIPRTLHMSLSGLRDISIIETPPEGRRPIRTTVGEYDEELVKLALEREVEREGQAFYLHNRVDTIDDAAEKLQQLAPNLRFLVAHGQMRERELEEKMHGFLRGDADVLVSTTIIESGLDIPQANTLIVERADQLGLSQLYQIRGRVGRSDVTAHAYLFYPDMSELTPEARARLATLADHTELGAGFAIAMRDLEIRGAGNLLGDEQSGHVAALGFELYVELLAEAVAELSGERRIAARPVRVDARVDAYVPAEYIESEALKIDLHRRLALTEDEDELRELQAATEDRFGPLPEPVENLFLIQEAKLKLARAGADYLVFRGGKASVGQMVLGSSELRDLRRRVDTAVYSTGNREITLREDGFPQALRLVDAILAARQAA*