ggKbase home page

13_1_20cm_4_scaffold_6470_1

Organism: 13_1_20CM_4_Alphaproteobacteria_65_11

partial RP 25 / 55 BSCG 26 / 51 ASCG 3 / 38
Location: comp(3..674)

Top 3 Functional Annotations

Value Algorithm Source
Type II/IV secretion system protein TadC, associated with Flp pilus assembly n=1 Tax=alpha proteobacterium JLT2015 RepID=M2T9H6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 227.0
  • Bit_score: 145
  • Evalue 5.50e-32
Type II/IV secretion system protein TadC, associated with Flp pilus assembly {ECO:0000313|EMBL:EMD83224.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteo UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 227.0
  • Bit_score: 145
  • Evalue 7.70e-32
Putative Flp pilus assembly protein TadC similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 220.0
  • Bit_score: 142
  • Evalue 1.30e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

alpha proteobacterium JLT2015 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGAGCACCCGCGTTGCCGATTTTCGGCTTCAAGACTGGCTCCCTCTCTGGCTCGGCGTCGATGATCTGATCGCCGCGCTGGCCGCGCTGGCAGTGCTGGTGGCGCTGATCGGCGTCTACAATGCGCTGCGCTCGCACAACCCGTTTGAGCGTCGGTTTGCGCAAATCGCGCAACGCAAGGAATCGCTGCGCCGGGCCGTTCTCGACAGCGGCCGCGGCAGCCGCCGGACAGTACAGGCGGCGGGACTGATGAGTGAGGCGGTCAAGCGCCTCAACCTGCTGCGTTCTCATCACGCGACCGAAGCACGCGCCCTGCTCTCCCAGGCCGGCATGCGCACGCGCGAGGCGATGATCCGCTATTTGTTTGCCCGCGCCTGCATGCCGCTGGTGTTCGCCAGCGCCATGGTTGCCGACTCATATGGGGCGCATGTGCTGCCGGTTCCGACAGACTTCCGCTGGGCGGCGGCATTCGCGGCGGCGATGTTCGGCTTTTTCGCACCCGGGGTGTTTATCAAGAACCTGGTCACCAAACGCGGCAAGCAGTTGCAACTGGGATTGCCCGACGCGCTGGATTTGATGGTGATTTGTGCGGAAGCGGGGCTGATCCTCGATGCCTCGCTGACGCGGGTATCGCGCGAGCTCGAACCGACTTGGCCCGAGATCAGCGAGGAA
PROTEIN sequence
Length: 224
MSTRVADFRLQDWLPLWLGVDDLIAALAALAVLVALIGVYNALRSHNPFERRFAQIAQRKESLRRAVLDSGRGSRRTVQAAGLMSEAVKRLNLLRSHHATEARALLSQAGMRTREAMIRYLFARACMPLVFASAMVADSYGAHVLPVPTDFRWAAAFAAAMFGFFAPGVFIKNLVTKRGKQLQLGLPDALDLMVICAEAGLILDASLTRVSRELEPTWPEISEE