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13_1_20cm_4_scaffold_2984_7

Organism: 13_1_20CM_4_Chloroflexi_66_15

partial RP 13 / 55 BSCG 16 / 51 ASCG 3 / 38
Location: comp(5328..5816)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SDX7_9CHLR id=1247114 bin=RBG9 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 159.0
  • Bit_score: 123
  • Evalue 1.60e-25
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gammaproteobacteria_66_13_curated UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 152.0
  • Bit_score: 126
  • Evalue 3.50e-26
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 150.0
  • Bit_score: 114
  • Evalue 3.60e-23

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Taxonomy

RBG_16_Gammaproteobacteria_66_13_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
TTGGGGTTATCGCGTAACCTTCATCACCAAAGCCACATCTACTCGTACTGCTACTACCACTCCGGCCGGCGCGAGGAGGCGGAGGACCTGGCCAGCGAGACCTTCCAGCGGGCGCTGGAGGGGCTGGACGATTTTGAGTGGCGAGGCATCCCATACTCAGCATGGTTGTACAAAGTCGCGTCGAATCTGATGTCCAAGCGGCGACGCCGGCCGCCCTGGATCGAGCTGCCCGATCCAATCGCCGGCAGCGGCGAGAACGATCCAGAACGGCTGTGGCTTCGGCGGGAGCAGGGCGATGAGCTGCACAAGGCCGTCCGTACGTTGCCGCTCGACCAGCGCGAGGCGGTCCTGCTCAAATTCGAGGGGCGTCTCAAGAACAGGGAGATTGGCGTGATCATGGGTCGCAGCGAGGGCGCGGTGAAGCTATTGCTGTTCCGGGCGGTTCACGGCCTGCGCCGGCGACTTCACGAACGGGAGAAGCCGCGATGA
PROTEIN sequence
Length: 163
LGLSRNLHHQSHIYSYCYYHSGRREEAEDLASETFQRALEGLDDFEWRGIPYSAWLYKVASNLMSKRRRRPPWIELPDPIAGSGENDPERLWLRREQGDELHKAVRTLPLDQREAVLLKFEGRLKNREIGVIMGRSEGAVKLLLFRAVHGLRRRLHEREKPR*