ggKbase home page

13_1_40cm_scaffold_1887_16

Organism: 13_1_40cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(11464..11925)

Top 3 Functional Annotations

Value Algorithm Source
endoribonuclease L-PSP (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 152.0
  • Bit_score: 175
  • Evalue 1.60e-41
transcription regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 154.0
  • Bit_score: 262
  • Evalue 5.00e-67
Endoribonuclease L-PSP id=4379943 bin=GWA2_Methylomirabilis_73_35 species=Flavobacteria bacterium MS024-2A genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 154.0
  • Bit_score: 258
  • Evalue 5.20e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGAGCGCAGAAGCTCGCCTCAAGGACAAGAACATCACGCTTCCCACGCCGACCAGCCCGATGGCGAACTACGTCGGCGCGGTGCGGACCGGCAATCTCCTCTTCGTCTCGGGCCATGGTCCGGTCCGCGACGGCAAGGCGACCGCGCGGGGCAAGGTCGGCAAGGATCTCTCGGTCGAGCAGGGTTATCAGGTCGCGCGCGAGGTGGGCCTGTCCCTGCTCGCCACGGTGCGCGCGAACCTCGGCAGCCTCGACAAGGTCCGGCGCGTGGTCAAGGTGCTCGGCATGGTGAACTCGGCGGACGGCTTCGGCGATCAGCCGAAGGTGATCAACGGCTTCTCGGACCTGATGGTCGAGGTGTTCGGCGAGGCCATCGGCAAGCATGCGCGCTCGGCGGTGGGGATGGCCGAGCTGCCGGTGGGGATTCCGGTCGAGATCGAGATGGTCCTCGAGGTAGAGTAG
PROTEIN sequence
Length: 154
MSAEARLKDKNITLPTPTSPMANYVGAVRTGNLLFVSGHGPVRDGKATARGKVGKDLSVEQGYQVAREVGLSLLATVRANLGSLDKVRRVVKVLGMVNSADGFGDQPKVINGFSDLMVEVFGEAIGKHARSAVGMAELPVGIPVEIEMVLEVE*