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13_1_40cm_UNK

Displaying items 1-50 of 226196 in total
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contig # features sequence size GC content (%) Cov Coding Density (%) notes
13_1_40cm_scaffold_62434 5 2091 bp 16.02 4.92 70.59
13_1_40cm_scaffold_181710
Species: Heterobasidion irregulare (50%)
2 1191 bp 17.55 2.95 63.73
13_1_40cm_scaffold_155565 0 1307 bp 17.90 5.38 0.00
13_1_40cm_scaffold_301266 5 1481 bp 17.96 3.73 32.75
13_1_40cm_scaffold_37239
Species: Pleurotus ostreatus (66.67%)
3 2677 bp 18.94 3.94 78.67
13_1_40cm_scaffold_172637
Species: Orchesella villosa (50%)
2 1230 bp 19.43 4.49 51.46
13_1_40cm_scaffold_187298 2 2326 bp 19.65 4.42 16.77
13_1_40cm_scaffold_192235 6 1147 bp 20.75 3.06 59.02
13_1_40cm_scaffold_8750 10 5082 bp 20.76 4.30 51.99
13_1_40cm_scaffold_193391
Species: Shiraia bambusicola (50%)
2 1143 bp 21.43 3.73 93.18
13_1_40cm_scaffold_38133 5 2648 bp 21.45 6.07 67.07
13_1_40cm_scaffold_97914
Species: Rhizophagus irregularis (100%)
2 2542 bp 21.75 4.74 20.54
13_1_40cm_scaffold_161855
Order: Pleosporales (66.67%)
3 1277 bp 21.93 3.54 95.61
13_1_40cm_scaffold_194694 1 1137 bp 22.25 12.36 8.97
13_1_40cm_scaffold_197141 0 1127 bp 22.27 22.27 0.00
13_1_40cm_scaffold_181485
Species: Genlisea aurea (100%)
1 1192 bp 22.32 6.95 41.28
13_1_40cm_scaffold_203403 1 1102 bp 22.32 7.29 6.53
13_1_40cm_scaffold_106799 1 1601 bp 22.36 6.74 7.87
13_1_40cm_scaffold_226311
Species: Rhizophagus irregularis (50%)
2 1014 bp 22.39 2.23 54.73
13_1_40cm_scaffold_160684
Species: human gut metagenome (100%)
2 1282 bp 22.39 8.81 57.33
13_1_40cm_scaffold_138749
Species: Rhizophagus irregularis (100%)
1 1393 bp 22.61 5.23 79.47
13_1_40cm_scaffold_197018 4 1128 bp 22.87 4.67 70.74
13_1_40cm_scaffold_112110
Species: Vitis vinifera (100%)
1 1562 bp 22.92 5.95 34.19
13_1_40cm_scaffold_67848 2 2008 bp 23.01 8.25 38.99
13_1_40cm_scaffold_223771 1 1023 bp 23.07 10.06 9.97
13_1_40cm_scaffold_163151 0 1271 bp 23.21 8.69 0.00
13_1_40cm_scaffold_101303
Species: Rhizophagus irregularis (100%)
4 3470 bp 23.23 6.73 28.70
13_1_40cm_scaffold_84644 3 1801 bp 23.32 3.76 52.30
13_1_40cm_scaffold_70844
Species: Shiraia bambusicola (100%)
1 1967 bp 23.34 3.96 78.70
13_1_40cm_scaffold_166526
Species: Rhizophagus irregularis (100%)
1 1256 bp 23.41 4.80 19.35
13_1_40cm_scaffold_199501 3 1855 bp 23.45 8.25 24.10
13_1_40cm_scaffold_32825 2 2837 bp 23.48 4.60 21.89
13_1_40cm_scaffold_129800 7 1445 bp 23.53 3.65 64.98
13_1_40cm_scaffold_197661 1 1125 bp 23.64 8.03 14.93
13_1_40cm_scaffold_262996 2 1572 bp 23.66 3.35 24.24
13_1_40cm_scaffold_171911 0 1233 bp 23.76 11.60 0.00
13_1_40cm_scaffold_157990
Species: Rhizophagus irregularis (50%)
2 1295 bp 23.86 7.37 46.80
13_1_40cm_scaffold_176284 1 1214 bp 23.89 4.76 8.15
13_1_40cm_scaffold_25620
Species: Rhizophagus irregularis (66.67%)
3 3179 bp 23.91 7.74 74.55
13_1_40cm_scaffold_52211
Class: Agaricomycetidae (66.67%)
3 2278 bp 23.92 3.86 75.86
13_1_40cm_scaffold_149099 1 1340 bp 24.03 6.74 11.87
13_1_40cm_scaffold_148303 2 1343 bp 24.05 3.55 30.38
13_1_40cm_scaffold_86818
Species: Rhizophagus irregularis (50%)
2 1778 bp 24.13 3.67 24.30
13_1_40cm_scaffold_199917 0 1116 bp 24.19 3.15 0.00
13_1_40cm_scaffold_24262 3 3260 bp 24.23 3.62 47.21
13_1_40cm_scaffold_87600
Species: Rhizophagus irregularis (50%)
2 1770 bp 24.35 6.66 45.59
13_1_40cm_scaffold_133488 2 1423 bp 24.39 3.70 35.42
13_1_40cm_scaffold_203017 3 1103 bp 24.48 3.64 85.95
13_1_40cm_scaffold_56308
Species: Rhizophagus irregularis (100%)
2 2755 bp 24.50 6.38 15.79
13_1_40cm_scaffold_22343
Species: Rhizophagus irregularis (100%)
3 3382 bp 24.75 6.53 36.55
Displaying items 1-50 of 226196 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.