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13_1_40cm_scaffold_541_29

Organism: 13_1_40CM_Acidobacteria_56_16

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(33932..35194)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=2 Tax=Rhodopseudomonas palustris RepID=B3QAJ6_RHOPT similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 405.0
  • Bit_score: 262
  • Evalue 5.80e-67
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:CDM64146.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatog similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 406.0
  • Bit_score: 270
  • Evalue 3.90e-69
HlyD family heavy metal efflux protein similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 405.0
  • Bit_score: 262
  • Evalue 1.60e-67

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGGATGACCTGACATCGAGCAATACTGAAAATGTCGAGCCATCCCCGAAACGGCGAAGAACTTTCTGGCTTGCTGCCGGGGTCATTGCCATAGTGGGCGCAATCTTTCTGCTTCTGCGCCAATCTCCCGGCGAGGAACCACGAACGGCAAAGGCGGACGGCGTATTCGCGCCGGGTGTGATTGAGGCCACGCCGGAACAACTGAAACAGATTCGTATCGAACCCGTCCGGGAGCAAACTATCGATCTCAATCTTGAAACGACCGGAAAAGTTGCCTTCAACGAGGATCGTTTGACCCCGGTCCTTGCGTCTTACCCGGGCCGAGTGTTGGAGGTACGCGCAAGCACAGGCGACGCCGTGAGCGTGGGCCAACCGCTGCTCGTCGTCGAATCGCCCGATGTAGTGGGCGCCGTCAACGATCTGATCGAAGCTCATACCAATGTCGATAAGGCAAAGATTGCGCTCGACATCGCCGAGAAGTCTGCCGAGCGCGCGCGGAGACTGCATGCGCAAGAAGCATTATCGACCAAAGAACTACAGTCATCGGAGTCCGGACTTGCTCACGCCCAGGAAGAGTACCGGCATGCGCAGTCCTCTGTGGAGATTGTACGGAATCGTCTGGCTTTGCTGGGCAAGAGCACGGATGAAATTGCTCAAATTGAGAATTTACCCACCGACCAGACCGATTGGCGGGTCGTCATTCGTGCTCCCATAGCGGGCACCATCGTCGAACGGAAGGTAGGGTTGGGGCAGTACGTCAAGCCCGACAATGCGGATCCCCTTTTCTTGATCGGCGATCTTTCCACGGTCTGGATCACCGTCGACATTTATGAAACAGATCTCTCTCGCGTCCGTATCGGAGCACCCGTCGACATTCGCGTTGTTGCCTATCCGGATCGGAACTTTCCGGCCCGGATCACGGCGATTAACCCCACAGTTGATGCGGCGACGCGAACGGTAAGAGTGCGGTGCCTGGTCCCAAATCTCAACGGCGTTTTGAAGCCCGAGATGTTCGCCCGCGTTCGAATCGGGGATGCCATGAATCGAAAGGTTCTGGCCGTTCCATCGACTGCGATTCTTACTGAAAACGACCGCTCAGTTGTTCTGGTCGAAGACTCTCTGGGGCGATTTCGTCCGAGGCAGGTGAAGAGCGGGCGTGAAATCGGCGGCTATACCGTCGTGGACGAAGGGCTTCGTCCGAATGATCGCGTCGTGACCAGCGGAGTGTTGTTGCTCAGCCGTTCAGGGAACAACAACCAATGA
PROTEIN sequence
Length: 421
MDDLTSSNTENVEPSPKRRRTFWLAAGVIAIVGAIFLLLRQSPGEEPRTAKADGVFAPGVIEATPEQLKQIRIEPVREQTIDLNLETTGKVAFNEDRLTPVLASYPGRVLEVRASTGDAVSVGQPLLVVESPDVVGAVNDLIEAHTNVDKAKIALDIAEKSAERARRLHAQEALSTKELQSSESGLAHAQEEYRHAQSSVEIVRNRLALLGKSTDEIAQIENLPTDQTDWRVVIRAPIAGTIVERKVGLGQYVKPDNADPLFLIGDLSTVWITVDIYETDLSRVRIGAPVDIRVVAYPDRNFPARITAINPTVDAATRTVRVRCLVPNLNGVLKPEMFARVRIGDAMNRKVLAVPSTAILTENDRSVVLVEDSLGRFRPRQVKSGREIGGYTVVDEGLRPNDRVVTSGVLLLSRSGNNNQ*