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13_1_40cm_scaffold_1178_17

Organism: 13_1_40CM_Rokubacteria_69_27

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 ASCG 14 / 38
Location: comp(14792..15790)

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 323.0
  • Bit_score: 485
  • Evalue 7.90e-134
Two component system response regulator, sigma54-specific id=4571215 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 332.0
  • Bit_score: 460
  • Evalue 1.10e-126
Fis family two component sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.9
  • Coverage: 343.0
  • Bit_score: 338
  • Evalue 2.40e-90

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 999
GTGGTCTTCCTCCGCTCCGAGCTCGAGCGCCAGCACGATCAGGGTGAGCTGGTCGGCCAGCACCCCGCCATGCAGAAGCTCTACCGGCTCATCACCCAGGTGGCGCGCACCACGACCACCGTCCTCGTCACGGGCGAGAGCGGCACCGGCAAGGAGCTGATCGCGCGCGCCATCCATCGGCAGGGACCGCGCCGGGACAAGCCGTTCGTGCCGGTCAATCCGGCGGCGCTGTCCGAGACCCTCGTGGAATCGGAGCTGTTCGGGCACGAGAAGGGGGCGTTCACCGGCGCCTATCAGCGCAAGCTGGGACGCTTCGAGCTGGCCCAGGGCGGTACCCTCTTTCTGGACGAGATCGGCTCGCTCAAGCCGGACCTGCAGGCCAAGCTGCTGCGCGTGCTCCAGGAGCGGGAGATCGAGCGCGTCGGCGGCACCCGGTCCATTCGCATCGACGCGCGCATCATCGTCGCCACCAACACCGATCTCAAACAGGCCGTGGCCCAGGGAACGTTCCGGGAGGACCTCTACTACCGGCTCAACGTCATGCCGATCACGGTGCCCCCGCTGCGCGAGCGCCGGGAAGACATTCCGCTGCTCGTGCCGCACTTCATCCGGCGCTACAACCAGGCCTTCAACAAGCGGGTCGAGGGACTGGCGCCGGAAGCGCTCAGCGTCCTCGGCGAATACTCCTGGCCGGGGAACGTCCGCGAGCTCCAGAACGTGATCGAGCGGCTGGTGGGCCTGGTGGAGGGGCCGGTCATCGGGGTCGACGACGTGCCCCTCGACCTGCTGCTGCCCGACCGCGTCCGGGCGGCCCGCGAGACGGGCGGCTTCGCCCTTGGCGAGGCCACCGAGGCGTTCGAGCGTCAGATGGTGCTCCGGGTGCTCCAGCGCGTCCGCTGGAACGTGAGTGAGGCGGCCAGGATCCTCGGGATGCACCGGAACTCGCTCAACGCGAAGCTGGCCCGCTGGGACCTGAAGGGTCCTGTCGGGGACGAGTGA
PROTEIN sequence
Length: 333
VVFLRSELERQHDQGELVGQHPAMQKLYRLITQVARTTTTVLVTGESGTGKELIARAIHRQGPRRDKPFVPVNPAALSETLVESELFGHEKGAFTGAYQRKLGRFELAQGGTLFLDEIGSLKPDLQAKLLRVLQEREIERVGGTRSIRIDARIIVATNTDLKQAVAQGTFREDLYYRLNVMPITVPPLRERREDIPLLVPHFIRRYNQAFNKRVEGLAPEALSVLGEYSWPGNVRELQNVIERLVGLVEGPVIGVDDVPLDLLLPDRVRAARETGGFALGEATEAFERQMVLRVLQRVRWNVSEAARILGMHRNSLNAKLARWDLKGPVGDE*