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13_1_40cm_scaffold_250_25

Organism: 13_1_40CM_Rokubacteria_69_27

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 ASCG 14 / 38
Location: comp(19939..20214)

Top 3 Functional Annotations

Value Algorithm Source
hupA1; DNA-binding protein HU 1; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 91.0
  • Bit_score: 173
  • Evalue 1.10e-40
Integration host factor, beta subunit, putative id=3360720 bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 92.0
  • Bit_score: 172
  • Evalue 2.20e-40
hupA1; DNA-binding protein HU 1 similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 90.0
  • Bit_score: 121
  • Evalue 9.70e-26

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 276
ATGACGAAAGCGGAGCTGATCGACGAGGTCTCGAAAGTCTCGAGTCTCACCAAAAAAGAGACCGAGACGATCGTCAACACGATCTTCGACAACATCACGGATGCCCTCGCCCAGGGGGACAAGGTCGAGCTTCGGGGCTTCGGCAGCTTCCGGATCCGCCACCGCAATTCACGGAAGGGACGCAATCCGAAGACGGGTTCGAGCGTCGACGTACCGGAAAAGCGCGTCCCCTTTTTCAAGGTCGGCAAGCGCCTGCGCGAGCTCGTGAACACGTGA
PROTEIN sequence
Length: 92
MTKAELIDEVSKVSSLTKKETETIVNTIFDNITDALAQGDKVELRGFGSFRIRHRNSRKGRNPKTGSSVDVPEKRVPFFKVGKRLRELVNT*