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13_1_40cm_scaffold_1030_3

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(1341..2099)

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 253.0
  • Bit_score: 252
  • Evalue 6.60e-64
Tol-pal system protein YbgF id=3806662 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 247.0
  • Bit_score: 235
  • Evalue 4.50e-59
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 31.5
  • Coverage: 248.0
  • Bit_score: 112
  • Evalue 1.60e-22

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGCCCTGCCTCGCGTTCATCGCCCTGGCGGTGCTCGCTTGTGGCTGTGCGACGCGGGGTAGCGTTCGCAACGTCCGGTCCGAGCTTGCCGCCCTCCGCAACGAGGCTGCGCTCCTTCGTCAGGCCGACGAGCAGATGTCGCGCGAGACCGCGACGGCGCTCGGAGAGATCAAGGCACTCGAGGAGCGCGTGAAGGACCTGACCGCCGTGGCGAACCGGACGACGGCCGACGTGGGCCGGCTCAACGCTCGGCTCGGCGAGACGGACGAGAGCATCAAGCGGATCCAGGCCGAGCTGACCGCAAAGCCCGTCGTCGCCGCTGTCCCACCACCAGCAGAGCGCCCGGCGCGCGAGCCTGTGCGGCCGGCACAGGCCGAGTCGGCCTACGGAGCGGCGCTGGCGACGTTTCGCGCTCGCGAGCATGGCCAGGCGGTTCTCGAGTTCCTCGATTTCATCGGCAGGTATCCCAAGCACCCGCTGGCGGCGAACGCTCAGTACTGGATCGGCGAGGCGTACTACTCTCAGCGCGATTATCGCCAGGCTCTCGTCGAATTCCAGAAGGTCCTCGAGTATCCGGCGGCGAACGGCAAGGCCGCCGACGCGCTCCTCAAGATGGGCCTCTGCTACACGAACCTTCGTGAGCCGACTCGCGCGAACGAGGTGTGGACGCGCGTGATCGGTGAGCACCCGTCCACGGAAGCCGCCGGCCACGCGCGCTCGTTCTTGCGGAATCGGCGGGCGCTCGCTCCCGGGCGCTGA
PROTEIN sequence
Length: 253
MPCLAFIALAVLACGCATRGSVRNVRSELAALRNEAALLRQADEQMSRETATALGEIKALEERVKDLTAVANRTTADVGRLNARLGETDESIKRIQAELTAKPVVAAVPPPAERPAREPVRPAQAESAYGAALATFRAREHGQAVLEFLDFIGRYPKHPLAANAQYWIGEAYYSQRDYRQALVEFQKVLEYPAANGKAADALLKMGLCYTNLREPTRANEVWTRVIGEHPSTEAAGHARSFLRNRRALAPGR*