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13_1_40cm_scaffold_1307_31

Organism: 13_1_40CM_Actinobacteria_66_12

partial RP 21 / 55 BSCG 18 / 51 ASCG 4 / 38
Location: comp(22119..22676)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67KL8_SYMTH similarity UNIREF
DB: UNIREF100
  • Identity: 36.2
  • Coverage: 174.0
  • Bit_score: 112
  • Evalue 4.30e-22
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Chloroflexi_68_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 36.2
  • Coverage: 177.0
  • Bit_score: 113
  • Evalue 3.50e-22
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 174.0
  • Bit_score: 112
  • Evalue 1.20e-22

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Taxonomy

RBG_13_Chloroflexi_68_17_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 558
ATGACCGGGGCTCCCGACGCGCGAGCACTTGCCGCGGGGCAGCTCGCGCACCAGGCGACCGGCGGCGACCTGGATGCCTTTGAAGAGCTGGTCCGCCGCATGCAGCGCCGCGTCTACGGTTTCGCCTATCAACATCTGAGAGACCTCGACGAGGCCCACGACCTCACCCAGGAGATCTTCGTCAAGCTCTTTCGCAACCTCGCGCGTTACGACGCCGCTCGCCCTTTCGAGCCCTGGTTTTGGAAGCTGGCCGCCAACACGACCATCAATTACCGGCGCAAGCGCGTCCCCGTGCCCACCGATCAATCCGCCGACCAGGGGGTCACCGGGCCCGATTCACCCTTCCCCGCGCACGATCCCGCGCTCCTCGACGCGTTGGCTCAGCTCGACCCCGCCTACCGCCTGCCGATCCTTCTTCACTATTACGCCGACCTACCGCTGGAGCAGGTCGCCCAGAGCTTGAGCCTGACGGTGCCGGCAATCAAGTCTCGCTTGCACCGGGCCCGCGCCCTTCTCCGGAACTCGTTGGCCGAGGCCGAGGAGGCCGGCGCCCAATGA
PROTEIN sequence
Length: 186
MTGAPDARALAAGQLAHQATGGDLDAFEELVRRMQRRVYGFAYQHLRDLDEAHDLTQEIFVKLFRNLARYDAARPFEPWFWKLAANTTINYRRKRVPVPTDQSADQGVTGPDSPFPAHDPALLDALAQLDPAYRLPILLHYYADLPLEQVAQSLSLTVPAIKSRLHRARALLRNSLAEAEEAGAQ*