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13_1_40cm_scaffold_12398_1

Organism: 13_1_40CM_Deltaproteobacteria_68_24

partial RP 20 / 55 BSCG 17 / 51 MC: 1 ASCG 5 / 38
Location: 3..401

Top 3 Functional Annotations

Value Algorithm Source
pseudouridylate synthase, 23S RNA-specific; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWC2_Nitrospirae_56_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 37.2
  • Coverage: 145.0
  • Bit_score: 93
  • Evalue 2.00e-16
Pseudouridine synthase id=3598872 bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 37.2
  • Coverage: 145.0
  • Bit_score: 93
  • Evalue 1.50e-16
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 138.0
  • Bit_score: 92
  • Evalue 7.00e-17

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Taxonomy

GWC2_Nitrospirae_56_14_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 399
CGGGTGCGCAAGGAGTATCGCGCGCTGGTCTCGCCTCCGCCCTCCGGCGATGAAGGCGTCAACGACAGTTCCGTCGGGTCGCGGCCGGCGCTGACGAAATGGCGCGTGGTCGAGCGCTACGTCAGCGCCGCCATGATCGCGGCGCTCCCGGAGACCGGGCGGACGCACCAGATCCGCCTGCACCTGCGCGATCTGGGATGTCCGCTGCTCGGCGACAAAGCGAACGGCGGCGAGGTCATTCTCACACGCCCCTCTGGCGCGCGGCACGACGTCAGCCGTCCGATGCTCCACGCGCTCTCGATAGGGCTGCGTCATCCCGCGGGCTTCGAGATGAACGTCGAGGCGCCCCTGCCCCCGGACTTCGAGGCGGCGCGCGCGTTCCTCGGCGCTGCGCGTTGA
PROTEIN sequence
Length: 133
RVRKEYRALVSPPPSGDEGVNDSSVGSRPALTKWRVVERYVSAAMIAALPETGRTHQIRLHLRDLGCPLLGDKANGGEVILTRPSGARHDVSRPMLHALSIGLRHPAGFEMNVEAPLPPDFEAARAFLGAAR*