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13_1_40cm_scaffold_457_23

Organism: 13_1_40CM_Chloroflexi_65_17

near complete RP 44 / 55 MC: 1 BSCG 49 / 51 ASCG 10 / 38
Location: 24180..24959

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Collinsella sp. CAG:166 RepID=R6A3C3_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 256.0
  • Bit_score: 248
  • Evalue 7.00e-63
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 256.0
  • Bit_score: 248
  • Evalue 9.70e-63
sigma-B/F/G subfamily RNA polymerase sigma-28 factor similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 258.0
  • Bit_score: 238
  • Evalue 2.00e-60

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Taxonomy

Collinsella sp. 4_8_47FAA → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 780
TTGGCTGCCAAGCCGCGGCTGTCCCGTGAGGAGCTGCGGGCCCTCCACCGTCGCTACAAGGAGACAACGGACCCCGCAGAACGCGATCGCATTCGCGCGCAGCTTGTTGACGCCTATCGAGACTTCGTCTACTTCCTGGCGCGAAAGTTTCAAAACCGAGGCGAGCCGCTGGACGACATCGTGCAGGTCGGCTACCTCGGCCTCATCAAGGCTATCGATCGCTTCGATCCCGACCTTGGCTACGAGTTCACGACCTTCGCGACCCTGACCGTTGCGGGCGAGATCAAGCGCCACTTCCGCGACAAGGGGACCGCGATCAGGTTTCCACGCCGCCTGCAGGAGCTCCATCAATCCGTGGTGCGCGTCAACGAGCAGATGAAAAACGAGCTCGGACGCGAACCGACGGTTGCCGAGCTGGCCGAGCGGCTTGGGGTGACGCCGGACGACGTGACGGAGGCGATGGAAATCGGGCCGGCCTACGTGCCGCTGTCTCTCGACCAGCCGATCGGCTCGAGCGATGGCCAGGACGCGCGCGCGGTTGCGGACCAGATCGGCAGCGAGGACCCTGAGCTCGACCGCGTCGAAATGCGCGACTTGCTGAACCGCGCGATGGAGCACCTGACGCCGCGCGAGCGCGCGATCATGGCCATGCGATTCTATGAGCAGATGTCACAGTCAGAGATCGCGCGACGGCTGGGCATCAGCCAGATGCACGTCTCGCGACTGCAGCGGGCGGCTCTGGAGCAGTTGCGAAAGTACGTCCCGCAAGAAACCGCCTGA
PROTEIN sequence
Length: 260
LAAKPRLSREELRALHRRYKETTDPAERDRIRAQLVDAYRDFVYFLARKFQNRGEPLDDIVQVGYLGLIKAIDRFDPDLGYEFTTFATLTVAGEIKRHFRDKGTAIRFPRRLQELHQSVVRVNEQMKNELGREPTVAELAERLGVTPDDVTEAMEIGPAYVPLSLDQPIGSSDGQDARAVADQIGSEDPELDRVEMRDLLNRAMEHLTPRERAIMAMRFYEQMSQSEIARRLGISQMHVSRLQRAALEQLRKYVPQETA*