ggKbase home page

13_1_40cm_scaffold_249_13

Organism: 13_1_40CM_Acidobacteria_65_14

near complete RP 47 / 55 MC: 2 BSCG 42 / 51 ASCG 12 / 38
Location: 15553..16305

Top 3 Functional Annotations

Value Algorithm Source
ybbA; transporter subunit: ATP-binding component of ABC superfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 250.0
  • Bit_score: 416
  • Evalue 3.40e-113
ABC-type antimicrobial peptide transport system,ATPase component id=12554206 bin=CNBR_ACIDO species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 247.0
  • Bit_score: 358
  • Evalue 4.60e-96
ybbA; transporter subunit: ATP-binding component of ABC superfamily similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 248.0
  • Bit_score: 309
  • Evalue 1.20e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGTCCGCAGTTATTTCGGTCAAAAACCTCGTCAAGACCTACGTGGTCGGCGAGGTGGAGGTCAAGGCGCTTCGCGGCGTGAACCTCGAAGTGCAGCGCGGCGAGTTTCTCGCCGTCGCTGGACCATCCGGCTCCGGCAAATCGACCTTCATGCACATCGTCGGCTGCCTCGATCGGCCGACATCGGGCCAGTACTTTCTCGACGGACAGGACGTCTCGCGGATGTCGAAGGACGCGCTGGCCGCGGTGCGAAACAAGAAGATCGGATTCGTCTTCCAGGGCTTCAATCTGCTCTCGCGCACCTCCGCGCTCGATAACGTCGAACTGCCGCTCCTCTATGGCGGCGGCGGGATGAAGACCGCCCAACGTCACAAGCGCGCGATGGAAGTCCTCAACGCCGTGGGACTCGTGGATCGCGCCGACCATCACCCGAATCAGTTGTCGGGCGGCCAGCAGCAGCGCGTCGCGATCGCGCGCGCGCTGATCAACAATCCGTCGATTCTTCTGGCGGACGAACCCACGGGGAACCTCGACACGAAAACCAGCATCGAAGTGATGGGGATCTTCCAGCGTCTCAATCGGGAGCGCGGCATTACCGTCGTGCTCATCACGCACGAGATGGATATCGCGGAGTACGGCACGCGGATGGTCACGTTCCGCGACGGCCTGGTCGTCGCCGACAAAGGAATCACGCGCCGCCGCATCGCGCAGGACGAGCTCGCCGCGCTACCGGAGCCGGCGGAAGCTGTATAG
PROTEIN sequence
Length: 251
MSAVISVKNLVKTYVVGEVEVKALRGVNLEVQRGEFLAVAGPSGSGKSTFMHIVGCLDRPTSGQYFLDGQDVSRMSKDALAAVRNKKIGFVFQGFNLLSRTSALDNVELPLLYGGGGMKTAQRHKRAMEVLNAVGLVDRADHHPNQLSGGQQQRVAIARALINNPSILLADEPTGNLDTKTSIEVMGIFQRLNRERGITVVLITHEMDIAEYGTRMVTFRDGLVVADKGITRRRIAQDELAALPEPAEAV*