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13_1_40cm_scaffold_0_25

Organism: 13_1_40CM_Gemmatimonadetes_69_22_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 7 / 38
Location: comp(22728..23174)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 148.0
  • Bit_score: 236
  • Evalue 1.60e-59
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 148.0
  • Bit_score: 268
  • Evalue 5.20e-69
RNA polymerase sigma-54 factor, RpoN similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 148.0
  • Bit_score: 247
  • Evalue 1.90e-63

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Taxonomy

RBG_16_Acidobacteria_68_9_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGATCCAGGCGATCGAGCAGCGCCGCCAGACGATGCTCAAGGTGATGAACTTCATCGTCGACCGGCAGCGCGAGTTCTTCGAAAAGGGCGTCGAGTACTTGAAGCCGCTCACGCTGCGCGAGGTCGCCGACGTCATCAACATGCACGAGAGCACCGTCAGCCGCGTGACCAACGAGAAGTACGTCCAGACGCCACGCGGCCTGCTACCGCTCAAGTTCTTCTTCTCGAGCGGTCTTTCGACCACCACCGGCGAGGACGCCAGCGCCCGATCGATCAAGGCGCAGATCCAGAAGATGGTGGACGACGAGGACCCCAAGAATCCGCTCACCGACCAGCAGATCGTCGAGATGTTCGCGCAGCGCGGCGTGAAGATCGCGCGCCGCACCGTCGCCAAGTACCGCGATCAGCTGGGTATCCTTCCGGCACGCATGCGCAAGCGGCTGTGA
PROTEIN sequence
Length: 149
MIQAIEQRRQTMLKVMNFIVDRQREFFEKGVEYLKPLTLREVADVINMHESTVSRVTNEKYVQTPRGLLPLKFFFSSGLSTTTGEDASARSIKAQIQKMVDDEDPKNPLTDQQIVEMFAQRGVKIARRTVAKYRDQLGILPARMRKRL*