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13_1_40cm_scaffold_25_26

Organism: 13_1_40CM_Gemmatimonadetes_69_22_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 7 / 38
Location: 28859..29110

Top 3 Functional Annotations

Value Algorithm Source
ptsN; PTS family fructose/mannitol (fru) porter component IIA; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] id=24490873 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Flexithrix dorotheae genus=Flexithrix taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 70.0
  • Bit_score: 112
  • Evalue 1.90e-22
ptsN; PTS family fructose/mannitol (fru) porter component IIA; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 70.0
  • Bit_score: 112
  • Evalue 2.70e-22
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 64.0
  • Bit_score: 74
  • Evalue 2.10e-11

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 252
ATGACTCGGGATGAGGACAAGCGCCGCGCACCTCCGCTCAACAACGACATTCTGACGATTGAAGAGGTCGCGGCCTACCTCCGGCTCACACCGCAGACCATCTACAAGTGGGCGCAGCAGAGGCGGATTCCGGCGGCGAAGCTGGGGAAGGAGTGGCGCTTTCGGAAGAGCATCGTCGATCGCTGGTTGGACGAGCAGATTCTCAGCGCCGCATCGGGTTTCGAGCACCTGAAGGAGGAGACGGAGCGGTAA
PROTEIN sequence
Length: 84
MTRDEDKRRAPPLNNDILTIEEVAAYLRLTPQTIYKWAQQRRIPAAKLGKEWRFRKSIVDRWLDEQILSAASGFEHLKEETER*