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13_1_40cm_scaffold_314_25

Organism: 13_1_40CM_Gemmatimonadetes_69_22_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 7 / 38
Location: comp(20412..21656)

Top 3 Functional Annotations

Value Algorithm Source
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIC3_KORVE id=5224104 bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 415.0
  • Bit_score: 297
  • Evalue 1.60e-77
hypothetical membrane protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 415.0
  • Bit_score: 629
  • Evalue 3.20e-177
MacB-like periplasmic core domain protein similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 414.0
  • Bit_score: 525
  • Evalue 1.30e-146

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1245
ATGCAGCTCACCGAAGCCGTCCTCCAGGCGCTCGCGACCCTCTGGGGCCACAAGTTGCGGTCCTTCTTCACCCTGCTCGGCATCATCGTGTCCGTGGCGTTCCTGATCGCGGTCGTCGCGGTAATTCAGGGGATGAACGCGTACGTGCGGGAACGGCTCGCCGGCGCGATCGTGGGCGTGAACGCGTTCCAGATTCGACGCGATCCGATCCAGGTGGGGTTCATCGACGACGAAGCGTGGAGCCGGATCCAGCGCCGGCCGATCATCGCGCCCGAGGACGTGCCCTACGTCGAGCGCGCCATCCCGGACGCGCAAGCCATCGCGCTGCAGTCGGGGTGGCCCACCCCCACGGCCGACGTCGCGTGGCGCAACCGGACGATCGGCGACGCGTTCGTGTTCGGCGTCACGGCCCCCTATCAGATCGTGCAGGACTACCGGCTCGCGGCGGGTGACCCGCTCAGCGACGTGGACGTGCGTGAGCGCCGCCTCGTGGCGGTCCTCGGGTTCGACGTGGCCGAGAAGCTGTTCGAAGACGCCGCGCGGGCCGTCGACCAGCGGGTGCGCGTGCGGGGTTGGACGTTCACCATCAAGGGCGTGATCGCGAAGAAGGGAACGGTGCTCGGCCAATCGTGGGACGGCTTCGTGATGCTCCCGCTCACCACGTTCGAGGCGTTGTATGGGCGTCGCCAGACGACGGTGATCTCCGTCAAGATGGCGGCGGCGGAGCAGGTGTCTGACGCGATGCTCCGGGCCGAGGAGGCGATGCGCATCGCGCACCGGCTGCGGCCGGGCCAGGACGACGACTTCACCGTCGACACCGCCGAGGGGCTCATTTCCTTCTGGCAGAGCCTTACGCGAGTCATCTTCACGGTCGTGCCGGCGGTGGTGGCCATCGGCATCGTGGTCGGCGGCATCGTGATCATGAACATCATGCTCATGAGCGTGACCGAGCGCACGCGGGAGATCGGGATTCGCAAGTCGCTGGGCGCCACACGCCGCGCGATTCGCCGACAATTCCTGGCCGAATCCGTGACCCTCTCGCTGGTGGGGGGCCTGCTCGGTCTCGCCGCGGGCACGGCGCTCGCCGGGCTGGTGGGAGCCGTCACTCCGCTGCCCGCACGGGTGACCGGGTGGTCGGTGGGCGTCGCGCTGGGCCTGGGGCTCACGGTAGGAGTGCTGTTCGGCGTGTATCCCGCGACCCGGGCGGCGCGGCTCGATCCCATCGCCGCGCTGCGAGCCGAATGA
PROTEIN sequence
Length: 415
MQLTEAVLQALATLWGHKLRSFFTLLGIIVSVAFLIAVVAVIQGMNAYVRERLAGAIVGVNAFQIRRDPIQVGFIDDEAWSRIQRRPIIAPEDVPYVERAIPDAQAIALQSGWPTPTADVAWRNRTIGDAFVFGVTAPYQIVQDYRLAAGDPLSDVDVRERRLVAVLGFDVAEKLFEDAARAVDQRVRVRGWTFTIKGVIAKKGTVLGQSWDGFVMLPLTTFEALYGRRQTTVISVKMAAAEQVSDAMLRAEEAMRIAHRLRPGQDDDFTVDTAEGLISFWQSLTRVIFTVVPAVVAIGIVVGGIVIMNIMLMSVTERTREIGIRKSLGATRRAIRRQFLAESVTLSLVGGLLGLAAGTALAGLVGAVTPLPARVTGWSVGVALGLGLTVGVLFGVYPATRAARLDPIAALRAE*