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13_1_40cm_scaffold_63_33

Organism: 13_1_40CM_Gemmatimonadetes_69_22_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 7 / 38
Location: 40472..40975

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 180.0
  • Bit_score: 134
  • Evalue 9.50e-29
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 154.0
  • Bit_score: 175
  • Evalue 8.80e-41
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 157.0
  • Bit_score: 144
  • Evalue 3.40e-32

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 504
ATGCCCGACGACCTGGCCGACGTGTACCGGACCACGTACCGCGCCCTGGTGCGGTTCCTGTACCGCAAGGTGTGGGACGCGGAGCGCGCGGAGGACCTCGCCCAGGAGGCGTTCGCCCGGGCGCTCGTCCACAAGCCCGCGCACGCGCGCGGCTGGCTGTTCGTCGTGGCGGCGAACATGGCGCGCGACGACGCCCGGCGCGCCGCGCGGGAGCGGCGCCACCTCACGCTCCTGAAGAGCGAGCCGCCGGCCAGCGCTCCGCCGTCGGATGAGGCGCTGCACACGGAAGGCGAGCGGTCGCAGGTGCGCACCGCACTCGAACAGCTCACGCCGCGCGACCGCGAAGTGCTCCTCCTGTGGGATTCGGGACTGTCGTACGACGAGATCGCCACGCAGACGGGGTTGGCGCGCGGCGCCATCGGCACGACCCTCGCCCGCGCGCGCCGCCGGCTGGTGGAGGCGTTCGAGGCGGGAAGGACAGGTGAACATGTCGCACGTGGATGA
PROTEIN sequence
Length: 168
MPDDLADVYRTTYRALVRFLYRKVWDAERAEDLAQEAFARALVHKPAHARGWLFVVAANMARDDARRAARERRHLTLLKSEPPASAPPSDEALHTEGERSQVRTALEQLTPRDREVLLLWDSGLSYDEIATQTGLARGAIGTTLARARRRLVEAFEAGRTGEHVARG*