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13_1_40cm_scaffold_1199_6

Organism: 13_1_40CM_Gemmatimonadetes_70_15_partial

partial RP 24 / 55 BSCG 25 / 51 ASCG 9 / 38
Location: comp(3492..4085)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 177.0
  • Bit_score: 146
  • Evalue 2.20e-32
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 175.0
  • Bit_score: 221
  • Evalue 1.30e-54
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 177.0
  • Bit_score: 146
  • Evalue 6.10e-33

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 594
ATGCGGACTGATCCGCCGTCCCAACTCCCTGGCGGGGTTGCGCGTATACCACAGGGAGACGAGGCCGAGCTGGCGGCGCGGGCGCGCGCCGGGGACCGGGCGGCCTTCGGTACCCTGGTGGAACGCTTCGCGGCGCAGGCCCGGCGGGTCGCGCGGGCCGTGCTGCAGAATCCCGACGATGCGGACGACGCCGCGCAGGACGCCTTCCTCTCGGCGCTGGTCAAGCTGGACCAGTACGACCCCCGCCGTCCCTTCGGCCCGTGGCTGATGCGGATCGTGGCGAACGCGGCGACGGACCGCCGCCGGCGGCGCGCGGTGCGCCAGACCGAGCCCCTGGCGCCGGAGCTCGCAGGCGGGGCTTCACACCCCGACCACGACGCCGAGCTGCGGGTGCTGGGTGAGCGGCTGCGGGTCGCGTTGGCGCAGCTGCCCGAACGCCGGCGCCTGGCGGTGGTGTTATTCGACGTGGAGGGCTATTCCCACGCCGAGATCGCCGACATCCTCGGCATCCCCGAGGGCACGGCGCGGTCGGAAGTGTTCCACGCACGGCGTGCGCTGCGCGTGCTGTTGCAGGACTGGAAGGAGGAGGGATGA
PROTEIN sequence
Length: 198
MRTDPPSQLPGGVARIPQGDEAELAARARAGDRAAFGTLVERFAAQARRVARAVLQNPDDADDAAQDAFLSALVKLDQYDPRRPFGPWLMRIVANAATDRRRRRAVRQTEPLAPELAGGASHPDHDAELRVLGERLRVALAQLPERRRLAVVLFDVEGYSHAEIADILGIPEGTARSEVFHARRALRVLLQDWKEEG*