ggKbase home page

13_1_40cm_scaffold_7280_11

Organism: 13_1_40CM_Gemmatimonadetes_70_15_partial

partial RP 24 / 55 BSCG 25 / 51 ASCG 9 / 38
Location: 10898..11437

Top 3 Functional Annotations

Value Algorithm Source
dapE; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 177.0
  • Bit_score: 194
  • Evalue 1.50e-46
Diaminopimelate epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DAPF_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 181.0
  • Bit_score: 136
  • Evalue 2.70e-29
Diaminopimelate epimerase similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 171.0
  • Bit_score: 148
  • Evalue 1.90e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 540
ATGACGGGGTCGGGCAACGACTTCGTCATGGTCGACGGGCGGGTCTCCACGCCCGGGGACTGGTCCCCAGCCGACATCCGGGCGGCGTGCGCGCGCGGCACCGGGGTGGGCGCCGACGGCGTCGTGTTCGTGCTCGCGGGGTCCGCGCCCGGGGCGGTCCGCATGATCTATTTCAACAGCGACGGCTCGCACGCGGCCATGTGCGGCAACGCGGCCCTGTGCAGCACCCGTCTCGCCGCGCACCTGGGCGTTGCGCCCGCAGAAGGGATGCGATTGGAGACCGACGCGGGCGTGTACGAGAGCCGCTGCACCGCGGATCCCGGACGGGCCGAGCTGCATCTGACTCCATTGCAGTCACCGGTGGCCGTGCCCGGCATCGAGCTCGAGCCAGGGGAGCGGCGTCTCGCCCTTGGCGTGGTCGGCGTGCCACACCTCTTGGTCCTGGTCGAAAACGTCGACCAGGTAGCGCTGGCGGCTCGAGGACGGTCCCTACGATTCCATCCCGCGCTCGCCCCCCAGGGGTCGAGGGGGAGACCCTAG
PROTEIN sequence
Length: 180
MTGSGNDFVMVDGRVSTPGDWSPADIRAACARGTGVGADGVVFVLAGSAPGAVRMIYFNSDGSHAAMCGNAALCSTRLAAHLGVAPAEGMRLETDAGVYESRCTADPGRAELHLTPLQSPVAVPGIELEPGERRLALGVVGVPHLLVLVENVDQVALAARGRSLRFHPALAPQGSRGRP*