ggKbase | organisms

Consensus taxonomy: Euryarchaeota → Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: 13_1_40cm_UNK

Properties

Avg. coverage: 20.00 Longest contig: 23.13 Kbp Bin length: 22.48 Mbp GC content: 62.57 %

Contigs count: 10569 Features count: 30185 rRNAs count: 0 tRNAs count: 180

Genome completeness

megabin RP 35 / 55 MC: 32 BSCG 23 / 51 MC: 20 ASCG 38 / 38 MC: 38

Displaying items 51-100 of 10569 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_scaffold_81123 Phylum: Euryarchaeota (50%)	4	1840 bp	63.64	2.86	93.15
13_1_40cm_scaffold_155356 Species: RBG_16_Euryarchaeota_62_10_curated (50%)	2	1308 bp	57.57	2.88	100.00
13_1_40cm_scaffold_196895 Species: Methanosarcina mazei (50%)	2	1128 bp	53.55	2.89	100.27
13_1_40cm_scaffold_82877 Phylum: Euryarchaeota (66.67%)	3	1820 bp	52.47	2.90	62.47
13_1_40cm_scaffold_219265 Species: RBG_16_Euryarchaeota_41_19_curated (50%)	2	1040 bp	49.71	2.90	63.75
13_1_40cm_scaffold_176692 Species: Halorhabdus tiamatea (100%)	1	1212 bp	50.83	2.90	99.75
13_1_40cm_scaffold_31124 Species: Methanothermus fervidus (100%)	1	2908 bp	35.90	2.93	65.61
13_1_40cm_scaffold_206939 Species: Thermococcus barophilus (100%)	2	1800 bp	49.44	2.93	100.17
13_1_40cm_scaffold_160438 Species: Methanoculleus sp. MH98A (50%)	2	1284 bp	46.18	2.93	91.59
13_1_40cm_scaffold_114390 Species: Methanoculleus bourgensis (50%)	2	2287 bp	51.86	2.96	67.03
13_1_40cm_scaffold_183416 Species: Candidatus Methanomassiliicoccus intestinalis (100%)	1	1184 bp	56.42	2.97	81.33
13_1_40cm_scaffold_132564 Species: RBG_13_Euryarchaeota_61_15_curated (100%)	2	1429 bp	63.89	2.99	97.83
13_1_40cm_scaffold_205727 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1093 bp	59.56	2.99	71.64
13_1_40cm_scaffold_150639 Species: Methanothermococcus okinawensis (50%)	2	1331 bp	32.31	3.02	91.51
13_1_40cm_scaffold_151938 Species: Methanoculleus bourgensis (100%)	1	1325 bp	50.94	3.03	92.15
13_1_40cm_scaffold_136750 Species: Methanosaeta harundinacea (50%)	2	1405 bp	44.77	3.04	88.61
13_1_40cm_scaffold_138090 Species: Methanosarcina sp. WH1 (50%)	2	1397 bp	59.06	3.05	24.91
13_1_40cm_scaffold_137727 Species: Methanoculleus marisnigri (50%)	2	1399 bp	58.47	3.05	92.64
13_1_40cm_scaffold_124168 Species: Methanosarcina siciliae (50%)	2	1480 bp	65.88	3.05	92.64
13_1_40cm_scaffold_171664 Species: Methanosphaerula palustris (50%)	2	1234 bp	51.70	3.05	78.28
13_1_40cm_scaffold_153462 Species: Thermoplasmatales archaeon E-plasma (100%)	1	1317 bp	50.27	3.05	60.59
13_1_40cm_scaffold_212503 Species: Methanoregula formicica (50%)	2	1066 bp	53.19	3.06	94.00
13_1_40cm_scaffold_112832 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1557 bp	54.40	3.06	96.72
13_1_40cm_scaffold_174599 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	1	1221 bp	67.98	3.08	97.30
13_1_40cm_scaffold_174154 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1223 bp	62.06	3.08	85.12
13_1_40cm_scaffold_126761 Species: Methanolacinia petrolearia (50%)	2	1464 bp	60.52	3.09	82.79
13_1_40cm_scaffold_94437 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1705 bp	55.43	3.09	82.87
13_1_40cm_scaffold_142187 Species: Candidatus Methanoperedens nitroreducens (50%)	2	1375 bp	48.80	3.10	100.15
13_1_40cm_scaffold_142262 Species: Methanocella conradii (50%)	2	1375 bp	45.38	3.10	98.18
13_1_40cm_scaffold_72515 Phylum: Euryarchaeota (50%)	4	1944 bp	50.87	3.10	87.35
13_1_40cm_scaffold_127846 Species: Methanocaldococcus sp. FS406-22 (50%)	2	1457 bp	47.29	3.10	68.77
13_1_40cm_scaffold_178832 Species: Methanosarcina barkeri (50%)	2	1203 bp	56.77	3.13	98.25
13_1_40cm_scaffold_178861 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1203 bp	51.54	3.13	90.52
13_1_40cm_scaffold_179262 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1201 bp	65.53	3.13	82.93
13_1_40cm_scaffold_306603 Phylum: Euryarchaeota (50%)	4	1521 bp	52.47	3.14	89.15
13_1_40cm_scaffold_145889 Species: Archaeoglobus sulfaticallidus (50%)	2	1356 bp	52.36	3.15	103.76
13_1_40cm_scaffold_58906 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	2149 bp	67.29	3.15	95.21
13_1_40cm_scaffold_180780 Species: Thermoplasmatales archaeon I-plasma (50%)	2	1195 bp	53.22	3.15	81.34
13_1_40cm_scaffold_200143 Species: Thermococcus eurythermalis (50%)	2	1115 bp	41.26	3.15	95.78
13_1_40cm_scaffold_201464 Species: Thermococcus barophilus (50%)	2	1110 bp	54.14	3.17	58.92
13_1_40cm_scaffold_108864 Species: Thermoplasma volcanium (100%)	1	1586 bp	53.47	3.17	65.26
13_1_40cm_scaffold_164030 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1267 bp	59.98	3.17	71.74
13_1_40cm_scaffold_223052 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	1	1026 bp	63.55	3.18	89.77
13_1_40cm_scaffold_134168 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1419 bp	66.31	3.18	100.21
13_1_40cm_scaffold_223337 Species: Archaeoglobus veneficus (50%)	2	1025 bp	51.12	3.18	50.05
13_1_40cm_scaffold_223363 Species: RBG_16_Euryarchaeota_68_13_curated (100%)	1	1025 bp	56.20	3.18	99.80
13_1_40cm_scaffold_223162 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1026 bp	65.40	3.18	99.42
13_1_40cm_scaffold_165978 Species: Methanocella arvoryzae (50%)	2	1259 bp	50.75	3.19	81.97
13_1_40cm_scaffold_165537 Species: Thermococcus litoralis (50%)	2	1260 bp	52.14	3.19	100.71
13_1_40cm_scaffold_184270 Species: RBG_19FT_COMBO_Euryarchaeota_56_21_curated (100%)	1	1181 bp	52.75	3.19	99.83

Displaying items 51-100 of 10569 in total

13_1_40CM_1_Euryarchaeota_megabin_63_20

13_1_40CM_1_Euryarchaeota_63_20

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_1_Euryarchaeota_megabin_63_20

13_1_40CM_1_Euryarchaeota_63_20

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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