ggKbase | organisms

Consensus taxonomy: Euryarchaeota → Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: 13_1_40cm_UNK

Properties

Avg. coverage: 20.00 Longest contig: 23.13 Kbp Bin length: 22.48 Mbp GC content: 62.57 %

Contigs count: 10569 Features count: 30185 rRNAs count: 0 tRNAs count: 180

Genome completeness

megabin RP 35 / 55 MC: 32 BSCG 23 / 51 MC: 20 ASCG 38 / 38 MC: 38

Displaying items 9951-10000 of 10569 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_scaffold_72959 Species: RBG_13_Euryarchaeota_61_15_curated (50%)	2	2460 bp	53.33	30.61	100.12
13_1_40cm_scaffold_102827 Species: RBG_13_Euryarchaeota_61_15_curated (50%)	2	1633 bp	64.30	10.61	100.12
13_1_40cm_scaffold_285183 Phylum: Euryarchaeota (66.67%)	3	1618 bp	64.28	8.53	100.12
13_1_40cm_scaffold_104972 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1615 bp	67.24	22.38	100.12
13_1_40cm_scaffold_94476 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	3179 bp	63.92	9.16	100.13
13_1_40cm_scaffold_109346 Species: Methanocaldococcus infernus (50%)	2	1582 bp	50.38	6.03	100.13
13_1_40cm_scaffold_109428 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1582 bp	65.30	79.81	100.13
13_1_40cm_scaffold_110921 Species: Aciduliprofundum sp. MAR08-339 (50%)	2	1570 bp	63.76	46.20	100.13
13_1_40cm_scaffold_209538 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1570 bp	64.59	62.67	100.13
13_1_40cm_scaffold_86932 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	2346 bp	67.43	12.30	100.13
13_1_40cm_scaffold_116059 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1534 bp	64.15	9.16	100.13
13_1_40cm_scaffold_121926 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1495 bp	64.95	11.75	100.13
13_1_40cm_scaffold_275068 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1492 bp	66.76	8.58	100.13
13_1_40cm_scaffold_101059 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	2223 bp	62.98	32.41	100.13
13_1_40cm_scaffold_128381 Species: Halostagnicola larsenii (50%)	2	1453 bp	60.70	3.80	100.14
13_1_40cm_scaffold_202495 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	2897 bp	64.96	10.74	100.14
13_1_40cm_scaffold_131481 Species: Halogranum salarium (50%)	2	1435 bp	70.38	12.77	100.14
13_1_40cm_scaffold_257531 Species: Haloferax larsenii (50%)	2	1426 bp	67.39	20.42	100.14
13_1_40cm_scaffold_294779 Species: Methanocaldococcus fervens (50%)	2	1420 bp	74.93	6.72	100.14
13_1_40cm_scaffold_120249 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	2124 bp	66.01	20.80	100.14
13_1_40cm_scaffold_136819 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1405 bp	65.20	19.65	100.14
13_1_40cm_scaffold_138305 Species: Candidatus Methanoperedens nitroreducens (50%)	2	1396 bp	49.86	5.21	100.14
13_1_40cm_scaffold_138934 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1393 bp	67.77	33.88	100.14
13_1_40cm_scaffold_140612 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1384 bp	68.93	8.52	100.15
13_1_40cm_scaffold_141675 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1378 bp	67.49	13.48	100.15
13_1_40cm_scaffold_142187 Species: Candidatus Methanoperedens nitroreducens (50%)	2	1375 bp	48.80	3.10	100.15
13_1_40cm_scaffold_142217 Species: Methanoplanus limicola (50%)	2	1375 bp	46.47	3.29	100.15
13_1_40cm_scaffold_142663 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	1372 bp	65.52	23.05	100.15
13_1_40cm_scaffold_160310 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	2037 bp	65.93	68.88	100.15
13_1_40cm_scaffold_67929 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	2007 bp	67.12	7.75	100.15
13_1_40cm_scaffold_69190 Species: RBG_16_Euryarchaeota_68_13_curated (100%)	2	1989 bp	65.81	9.34	100.15
13_1_40cm_scaffold_69464 Species: Methanobacterium paludis (50%)	2	1986 bp	65.01	5.81	100.15
13_1_40cm_scaffold_70324 Species: Methanoregula boonei (50%)	2	1974 bp	59.93	14.75	100.15
13_1_40cm_scaffold_154417 Species: Methanosarcina mazei (50%)	2	1312 bp	51.98	4.59	100.15
13_1_40cm_scaffold_73422 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1932 bp	68.94	5.72	100.16
13_1_40cm_scaffold_162823 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1273 bp	66.77	11.24	100.16
13_1_40cm_scaffold_162878 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1273 bp	70.31	3.94	100.16
13_1_40cm_scaffold_41871 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	2531 bp	64.05	6.15	100.16
13_1_40cm_scaffold_73202 Species: RBG_16_Euryarchaeota_68_12_curated (66.67%)	3	2531 bp	65.07	10.31	100.16
13_1_40cm_scaffold_164724 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1264 bp	65.59	6.75	100.16
13_1_40cm_scaffold_168233 Species: Methanocaldococcus infernus (50%)	2	1249 bp	49.32	2.41	100.16
13_1_40cm_scaffold_168198 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1249 bp	64.69	7.64	100.16
13_1_40cm_scaffold_43782 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	2480 bp	67.78	94.53	100.16
13_1_40cm_scaffold_131792 Species: Archaeoglobus sulfaticallidus (50%)	2	2465 bp	66.98	5.29	100.16
13_1_40cm_scaffold_172291 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1231 bp	66.94	8.97	100.16
13_1_40cm_scaffold_173069 Species: Haloarcula californiae (50%)	2	1228 bp	49.92	2.66	100.16
13_1_40cm_scaffold_267710 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	1833 bp	62.63	11.23	100.16
13_1_40cm_scaffold_187026 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1833 bp	65.52	15.61	100.16
13_1_40cm_scaffold_177196 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1210 bp	69.01	4.77	100.16
13_1_40cm_scaffold_177298 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1210 bp	67.27	16.18	100.16

Displaying items 9951-10000 of 10569 in total

13_1_40CM_1_Euryarchaeota_megabin_63_20

13_1_40CM_1_Euryarchaeota_63_20

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_1_Euryarchaeota_megabin_63_20

13_1_40CM_1_Euryarchaeota_63_20

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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