ggKbase home page

13_1_40cm_2_scaffold_16406_6

Organism: 13_1_40CM_2_Rokubacteria_70_45

partial RP 39 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: comp(6721..7428)

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptionel regulator; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 237.0
  • Bit_score: 225
  • Evalue 1.00e-55
Two component, sigma54 specific, transcriptional regulator, Fis family id=5017004 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 237.0
  • Bit_score: 223
  • Evalue 1.70e-55
response regulator receiver modulated diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 249.0
  • Bit_score: 91
  • Evalue 4.70e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 708
GTGCGGGTCCTGATCGTGGAAGACAACGCGGATATCGGCGGGCTCCTGGTGGACTTCGCCCGCGAGCTCGGCCACGCGGCGGACCTCGCGCCGTCTGCGGAAGCCGCGCTGACGCGACTTCGGGCCGAGCGCCCGGATCTGGTCCTGCTCGATCTCAGGCTCCCGGGCATGAGCGGCCTCGACTTCCTCCAGCTCCGTCCGGTGCGCGACTCCCGCGTCCCGATCGTGGTGATCTCGGGAATCGCGACCGAGGGGGACGCACAGGAATGTCTGCGGCTCGGGGCCCTCGACTTCCTGCCGAAGCCCATCCCGTTCGATCGTCTTCGACAGATTCTCGAGGTCTTCGAGCCGCTCGCGCTCACGCAGACCGTGGCGGTCGCGGGGCGACCGGCCGAGCGGCGTCGCGCGCCTCGCGTGCGGGTCCAGCTGCCCGTCCAGGTGAGCGAGTACGGCAGCGTCGACTGGCTGACGACGAGCGTCGACTTGAGCCCGTCGGGCATGAAGGTCCGGCCGCTCTGGGCGGCGCCAGAGTCGGCGGTGCGGCTCTCGGTCACGCTGCCCGATGACGGCGAGCGGCTCGAGATCGTCTCCGTGCTGATCCGGGTCGACCTCGACGGTTACGCGTTCTACTTCACCAACCTGACCGGACCGCAGCTCGAGCGCCTGACGCGCCTCATCAATCGTCTGAGCGCGCAACCGACCCCTTGA
PROTEIN sequence
Length: 236
VRVLIVEDNADIGGLLVDFARELGHAADLAPSAEAALTRLRAERPDLVLLDLRLPGMSGLDFLQLRPVRDSRVPIVVISGIATEGDAQECLRLGALDFLPKPIPFDRLRQILEVFEPLALTQTVAVAGRPAERRRAPRVRVQLPVQVSEYGSVDWLTTSVDLSPSGMKVRPLWAAPESAVRLSVTLPDDGERLEIVSVLIRVDLDGYAFYFTNLTGPQLERLTRLINRLSAQPTP*