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13_1_40cm_2_scaffold_57468_4

Organism: 13_1_40CM_2_Rokubacteria_70_45

partial RP 39 / 55 MC: 1 BSCG 39 / 51 ASCG 11 / 38
Location: 1901..2419

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 172.0
  • Bit_score: 270
  • Evalue 1.20e-69
16S rRNA-processing protein RimM id=5019513 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 166.0
  • Bit_score: 246
  • Evalue 2.30e-62
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 168.0
  • Bit_score: 109
  • Evalue 1.20e-21

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 519
GTGAGCGATCGCCTCGTCGTGATCGGCGCGATCGCCCGGACCCACGGGCTCGCCGGAGAGGTCCGCGTGACGCCGATGACGGACGATCCGGAGCGGTTCGGGCGGGTGCGGGAGTGCGTGCTGTGGGACACGGCGCACGACCGGCGCGAGCGGTACCGCATCACCGGCACGCGGCGGCAGGGCGCGGCGATCGTGATGACGCTCGAGGGGTGCGCCTCCCCCGAGGCGGCGGCCGCGCTCGTGGGACGTCTGGTGGCGCTGCCGGAGGACGAGGCGCTGCCGCCCGGGCCGGGGCGCTTCTACCCCTGGCAGCTCGAGGGCTGCCGCGTGCTCACGGAGGACGGGCGGGAGGTCGGGCGGGTGACCGGCATCGAGCGGGCGCCGGCGCAGGACCTCTGGATCGTGCGCGACGACACGCGGGAGCATCTGATCCCAGCGGTTCCCGAGATCGTGAGCGAGGTCGACCTCGCGGCGCGCCGCGTGGTCATCCGGCCGCCCGAGGGGCTGCTCGACTTGTAG
PROTEIN sequence
Length: 173
VSDRLVVIGAIARTHGLAGEVRVTPMTDDPERFGRVRECVLWDTAHDRRERYRITGTRRQGAAIVMTLEGCASPEAAAALVGRLVALPEDEALPPGPGRFYPWQLEGCRVLTEDGREVGRVTGIERAPAQDLWIVRDDTREHLIPAVPEIVSEVDLAARRVVIRPPEGLLDL*