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13_1_40cm_2_scaffold_76903_1

Organism: 13_1_40CM_2_Myxococcales_68_15

partial RP 24 / 55 MC: 1 BSCG 22 / 51 ASCG 5 / 38 MC: 1
Location: comp(2..637)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKT1_HALO1 similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 211.0
  • Bit_score: 214
  • Evalue 9.10e-53
Type IV fimbriae expression regulatory protein PilR {ECO:0000313|EMBL:AKF08275.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; San similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 211.0
  • Bit_score: 219
  • Evalue 4.00e-54
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 212.0
  • Bit_score: 214
  • Evalue 2.60e-53

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Taxonomy

Sandaracinus amylolyticus → Sandaracinus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
GTGAAGGACGCCCAGGGCGAGACCGAGGTGATCCTCATGACCGCGTTCGGCAGCGACGACTTGCGCCGCCAGGCGCTGGAGCTCGGCGCCTACGGGTACGTGGAAAAATCGCCCACCCTCGCTTCCGAGGTGATCGCGCTGGTCAAGGCGGCGGTGCACAAGCGCGAGCTGGCGCGGCGCGGGCGCATCCTCGCTCAGGACAACGAGCTCCTGCGCGAGCAGCTCTCGGCCCGCGGCCGGTTCGAGTCGATGGTGGCGCGCAGTTCCGCCATGCATCAGGTCTTCGAGGTCGTGGAGAAGGTGGCCGTCGCCCGCACCACGGTCCTCATCACTGGCGAGAGCGGCGTCGGCAAGGAGTTGGTCGCGCGCGCCGTCCACGCGCGCAGCCCCCGCGCCTCGGCGCCGTTCGTTCCGGTGAACTGCGGCGCGATTCCGGAGGGGCTGATCGAGTCCGAGCTGTTCGGGCACGCGAAGGGCGCCTTCACTGGCGCGCAGGGAGCGAAGCAGGGCCTCTTCCAGGCTGCGCAGGATGGCACGCTGTTCCTCGACGAGATCGGCGAGCTGCCGCTCAGCCTGCAAGTGAAGCTCCTGCGCGCCATCCAGGACCGGCGCATCCGGCCCGTCGGCGACACGGCC
PROTEIN sequence
Length: 212
VKDAQGETEVILMTAFGSDDLRRQALELGAYGYVEKSPTLASEVIALVKAAVHKRELARRGRILAQDNELLREQLSARGRFESMVARSSAMHQVFEVVEKVAVARTTVLITGESGVGKELVARAVHARSPRASAPFVPVNCGAIPEGLIESELFGHAKGAFTGAQGAKQGLFQAAQDGTLFLDEIGELPLSLQVKLLRAIQDRRIRPVGDTA